Python Graph-transformer Resources

A tool to get a minimalist view of any architecture This tool has only be tested with the models included in this repo. Therefore, I can't guarantee t

This is the repository for codes for ML, domain generation, graph generation of Asymmetric Buckling Columns (ABC) dataset in the paper "Learning Mechanically Driven Emergent Behavior with Message Passing Neural Networks".

Graph Coloring - Weighted Vertex Coloring Problem This project proposes several local searches and an MCTS algorithm for the weighted vertex coloring

Code Impementation for "Mold into a Graph: Efficient Bayesian Optimization over Mixed Spaces" This repo contains the implementation of GEBO algorithm.

Hierarchical Token Semantic Audio Transformer Introduction The Code Repository for "HTS-AT: A Hierarchical Token-Semantic Audio Transformer for Sound

Graph Convolution Simulator (GCS) Source code for "Understanding Knowledge Integration in Language Models with Graph Convolutions" Requirements: PyTor

Python-AmongUsProblem Project in which we modelise an Among Us problem using graph theories. The rules are as following: Total of 100 players 10 playe

TGraM Multi-Object Tracking in Satellite Videos with Graph-Based Multi-Task Modeling, Qibin He, Xian Sun, Zhiyuan Yan, Beibei Li, Kun Fu Abstract Rece

Regression Transformer Codebase to experiment with a hybrid Transformer that combines conditional sequence generation with regression . Development se

NeuralForecast is a Python library for time series forecasting with deep learning models. It includes benchmark datasets, data-loading utilities, evaluation functions, statistical tests, univariate model benchmarks and SOTA models implemented in PyTorch and PyTorchLightning.

VocAug It is difficult to find a script which can augment VOC-format dataset, especially the bbox. Or find a script needs complex requirements so it i

NLP-Summarizer Natural language processing summarizer using 3 state of the art Transformer models: BERT, GPT2, and T5 This project aimed to provide in

Expense Tracker is a very good tool to keep track of your expenseditures and the total money you saved.

LabGraph is a a Python-first framework used to build sophisticated research systems with real-time streaming, graph API, and parallelism.

Iterative refinement graph neural network for antibody sequence-structure co-des

ADE20k Semantic segmentation with MAE Getting started Install the mmsegmentation

Hierarchical Token Semantic Audio Transformer Introduction The Code Repository for "HTS-AT: A Hierarchical Token-Semantic Audio Transformer for Sound

GraphNLI: A Graph-based Natural Language Inference Model for Polarity Prediction in Online Debates Vibhor Agarwal, Sagar Joglekar, Anthony P. Young an

Equivariant Subgraph Aggregation Networks (ESAN) This repository contains the official code of the paper Equivariant Subgraph Aggregation Networks (IC

Hatchet Hatchet is a Python-based library that allows Pandas dataframes to be indexed by structured tree and graph data. It is intended for analyzing

Multi-Variate Time-Series Transformer This repo contains the code required to train the multivariate time-series Transformer. Download the data The No

DIR-GNN "Discovering Invariant Rationales for Graph Neural Networks" (ICLR 2022)

Live Demo (currently not running, on it) Espial is an engine for automated organization and discovery in knowledge bases. It can be adapted to run wit

MoRecon - A tool for reconstructing missing frames in motion capture data.

BLIP: Bootstrapping Language-Image Pre-training for Unified Vision-Language Understanding and Generation

Simple Transformer An implementation of the "Attention is all you need" paper without extra bells and whistles, or difficult syntax. Note: The only ex

TorchGRL TorchGRL is the source code for our paper Graph Convolution-Based Deep Reinforcement Learning for Multi-Agent Decision-Making in Mixed Traffi

GNN_PPI Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction". Lear

DocEnTR Description Pytorch implementation of the paper DocEnTr: An End-to-End Document Image Enhancement Transformer. This model is implemented on to

ruCLIP-SB RuCLIP-SB (Russian Contrastive Language–Image Pretraining SWIN-BERT) is a multimodal model for obtaining images and text similarities and re

machine-learning-with-graphs My solutions for Stanford University course CS224W: Machine Learning with Graphs Fall 2021 colabs Course materials can be

Computer-Vision-Paper-Reviews Computer Vision Paper Reviews with Key Summary along Papers & Codes. Jonathan Choi 2021 The repository provides 100+ Pap

VRT: A Video Restoration Transformer Jingyun Liang, Jiezhang Cao, Yuchen Fan, Kai Zhang, Rakesh Ranjan, Yawei Li, Radu Timofte, Luc Van Gool Computer

FlatTN This repository contains code accompanying the paper "An End-to-End Chinese Text Normalization Model based on Rule-Guided Flat-Lattice Transfor

DecisionTransformer_StepbyStep Intro Decision Transformer: A brand new Offline RL Pattern. 这是关于NeurIPS 2021 热门论文Decision Transformer的复现。 👍 原文地址: Deci

GenGNN: A Generic FPGA Framework for Graph Neural Network Acceleration Stefan Abi-Karam*, Yuqi He*, Rishov Sarkar*, Lakshmi Sathidevi, Zihang Qiao, Co

Fast Differentiable Matrix Sqrt Root Geometric Interpretation of Matrix Square Root and Inverse Square Root This repository constains the official Pyt

This repository contains the code for TABS, a 3D CNN-Transformer hybrid automated brain tissue segmentation algorithm using T1w structural MRI scans. TABS relies on a Res-Unet backbone, with a Vision Transformer embedded between the encoder and decoder layers.

SegTransVAE: Hybrid CNN - Transformer with Regularization for medical image segmentation This repo is the official implementation for SegTransVAE. Seg

Visual Representation Learning with Self-Supervised Attention for Low-Label High-Data Regime Created by Prarthana Bhattacharyya. Disclaimer: This is n

Transformer based SAR image despeckling Using the code: The code is stable while using Python 3.6.13, CUDA =10.1 Clone this repository: git clone htt

OntoProtein This is the implement of the paper "OntoProtein: Protein Pretraining With Ontology Embedding". OntoProtein is an effective method that mak

On Evaluation Metrics for Graph Generative Models Authors: Rylee Thompson, Boris Knyazev, Elahe Ghalebi, Jungtaek Kim, Graham Taylor This is the offic

GNDC For submission to IEEE TKDE. Overview Here we provide the implementation of GND-Nets (Graph Neural Diffusion Networks) in TensorFlow. The reposit

Author Name Disambiguation with Knowledge Graph Embeddings using Literals This is the repository for the master thesis project on Knowledge Graph Embe

DocEnTR Description Pytorch implementation of the paper DocEnTr: An End-to-End Document Image Enhancement Transformer. This model is implemented on to

Semantic Segmentation Easy to use and customizable SOTA Semantic Segmentation models with abundant datasets in PyTorch Features Applicable to followin

GreaseLM: Graph REASoning Enhanced Language Models This repo provides the source code & data of our paper "GreaseLM: Graph REASoning Enhanced Language

FSRA This repository contains the dataset link and the code for our paper A Transformer-Based Feature Segmentation and Region Alignment Method For UAV

EdiBERT, a generative model for image editing EdiBERT is a generative model based on a bi-directional transformer, suited for image manipulation. The

TGRNet: A Table Graph Reconstruction Network for Table Structure Recognition Xue, Wenyuan, et al. "TGRNet: A Table Graph Reconstruction Network for Ta

On the Adversarial Robustness of Visual Transformer Code for our paper "On the Adversarial Robustness of Visual Transformers"

DB-AIAT: A Dual-branch attention-in-attention transformer for single-channel SE

STAR_KGC This repo contains the source code of the paper accepted by WWW'2021. "Structure-Augmented Text Representation Learning for Efficient Knowled

CSKG: The CommonSense Knowledge Graph CSKG is a commonsense knowledge graph that combines seven popular sources into a consolidated representation: AT

RoNER RoNER is a Named Entity Recognition model based on a pre-trained BERT transformer model trained on RONECv2. It is meant to be an easy to use, hi

Graph Analysis From Scratch Goal In this notebook we wanted to implement some functionalities to analyze a weighted graph only by using algorithms imp

Roam to Logseq The script loads a json export of a Roam graph and cleans it up f

Vit-ImageClassification Introduction This project uses ViT to perform image clas

STonKGs STonKGs is a Sophisticated Transformer that can be jointly trained on biomedical text and knowledge graphs. This multimodal Transformer combin

swin-transformer-ocr ocr with swin-transformer Overview Simple and understandable swin-transformer OCR project. The model in this repository heavily r

Multimodal Co-Attention Transformer (MCAT) for Survival Prediction in Gigapixel Whole Slide Images [ICCV 2021] © Mahmood Lab - This code is made avail

RATCHET: RAdiological Text Captioning for Human Examined Thoraxes RATCHET is a Medical Transformer for Chest X-ray Diagnosis and Reporting. Based on t

R2Gen This is the implementation of Generating Radiology Reports via Memory-driven Transformer at EMNLP-2020. Citations If you use or extend our work,

ICCV Workshop 2021 VTGAN This code is for our paper "VTGAN: Semi-supervised Retinal Image Synthesis and Disease Prediction using Vision Transformers"

T2Net Task Transformer Network for Joint MRI Reconstruction and Super-Resolution (MICCAI 2021) [Paper][Code] Dependencies numpy==1.18.5 scikit_image==

COVID-ViT COVID-VIT: Classification of Covid-19 from CT chest images based on vision transformer models This code is to response to te MIA-COV19 compe

TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification [NeurIPS 2021] Abstract Multiple instance learn

MT-UNet Update 2022/01/05 By another round of training based on previous weights, our model also achieved a better performance on ACDC (91.61% DSC). W

SegPC-2021 This is the official repository for the ISBI 2021 paper Transformer Assisted Convolutional Neural Network for Cell Instance Segmentation by

[AAAI2022] UCTransNet This repo is the official implementation of "UCTransNet: Rethinking the Skip Connections in U-Net from a Channel-wise Perspectiv

nnFormer: Interleaved Transformer for Volumetric Segmentation Code for paper "nnFormer: Interleaved Transformer for Volumetric Segmentation ". Please

On Evaluation Metrics for Graph Generative Models Authors: Rylee Thompson, Boris Knyazev, Elahe Ghalebi, Jungtaek Kim, Graham Taylor This is the offic

Attention Probe: Vision Transformer Distillation in the Wild Jiahao Wang, Mingdeng Cao, Shuwei Shi, Baoyuan Wu, Yujiu Yang In ICASSP 2022 This code is

GPU implementation of kNN and SNN GPU implementation of $k$-Nearest Neighbors and Shared-Nearest Neighbors Supported by numba cuda and faiss library E

Attention Probe: Vision Transformer Distillation in the Wild Jiahao Wang, Mingdeng Cao, Shuwei Shi, Baoyuan Wu, Yujiu Yang In ICASSP 2022 This code is

TensorDebugger (TDB) is a visual debugger for deep learning. It extends TensorFlow (Google's Deep Learning framework) with breakpoints + real-time visualization of the data flowing through the computational graph.

Official Pytorch implementation of ICLR 22 paper Fast Differentiable Matrix Square Root

GPlearn_finiance_stock_futures_extension This implementation contains the application of GPlearn's symbolic transformer on a commodity futures sector

ServiceX_Uproot_Transformer ServiceX Transformer that converts flat ROOT ntuples into columnwise data Usage You can invoke the transformer from the co

Awesome Visual-Transformer Collect some Transformer with Computer-Vision (CV) papers. If you find some overlooked papers, please open issues or pull r

Transformer-in-Vision Recent Transformer-based CV and related works. Welcome to comment/contribute! Keep updated. Resource SCENIC: A JAX Library for C

Transformer-in-Vision A paper list of some recent Transformer-based CV works. If you find some ignored papers, please open issues or pull requests. **

awesome-fast-attention A curated list of efficient attention modules

Compact Bidirectional Transformer for Image Captioning Requirements Python 3.8 Pytorch 1.6 lmdb h5py tensorboardX Prepare Data Please use git clone --

VMT Video-Music Transformer (VMT) is an attention-based multi-modal model, which generates piano music for a given video. Paper https://arxiv.org/abs/

DPT Official Pytorch implementation of the paper "Detail-Preserving Transformer for Light Field Image Super-Resolution" accepted by AAAI 2022 . Update

Full Transformer Framework for Robust Point Cloud Registration with Deep Information Interaction. arxiv This repository contains python scripts for tr

TransZero++ This repository contains the testing code for the paper "TransZero++: Cross Attribute-guided Transformer for Zero-Shot Learning" submitted

TransVTSpotter: End-to-end Video Text Spotter with Transformer Introduction A Multilingual, Open World Video Text Dataset and End-to-end Video Text Sp

DualFormer This repo is the implementation of our manuscript entitled "Local-Global Stratified Transformer for Efficient Video Recognition". Our model

ECLARE ECLARE: Extreme Classification with Label Graph Correlations @InProceedings{Mittal21b, author = "Mittal, A. and Sachdeva, N. and Agrawal

GalaXC GalaXC: Graph Neural Networks with Labelwise Attention for Extreme Classification @InProceedings{Saini21, author = {Saini, D. and Jain,

MADT: Offline Pre-trained Multi-Agent Decision Transformer A link to our paper can be found on Arxiv. Overview Official codebase for Offline Pre-train

必要なソフト・パッケージ Python3 Numpy JSON Matplotlib 動作確認環境 MacBook Air M1 Python 3.8.2 (arm64) Numpy 1.22.0 Matplotlib 3.5.1 JSON 2.0.9 使い方 draw_time_histgram(

Good news! Our new work exhibits state-of-the-art performances on DocUNet benchmark dataset: DocScanner: Robust Document Image Rectification with Prog

TransFusion-Pose TransFusion: Cross-view Fusion with Transformer for 3D Human Pose Estimation Haoyu Ma, Liangjian Chen, Deying Kong, Zhe Wang, Xingwei

Transformers-Tutorials Hi there! This repository contains demos I made with the Transformers library by 🤗 HuggingFace. Currently, all of them are imp

GraphMLTutorialNLDL22 Tutorial NLDL22: Introduction to Graph Machine Learning, with Jupyter notebooks This tutorial takes place during the conference

Cross-modal Retrieval using Transformer Encoder Reasoning Networks This project reimplements the idea from "Transformer Reasoning Network for Image-Te