Python Multimodal-imaging Resources

Deep Learning Tutorial for Kaggle Ultrasound Nerve Segmentation competition, using Keras This tutorial shows how to use Keras library to build deep ne

Sparse deconvolution Python v0.3.0 Official Python implementation of the 'Sparse deconvolution', and the CPU (NumPy) and GPU (CuPy) calculation backen

G2S This is the official code for ICRA 2021 Paper: Multimodal Scale Consistency and Awareness for Monocular Self-Supervised Depth Estimation by Hemang

History Aware Multimodal Transformer for Vision-and-Language Navigation This repository is the official implementation of History Aware Multimodal Tra

Multimodal Virtual Point 3D Detection Turning pixels into virtual points for multimodal 3D object detection. Multimodal Virtual Point 3D Detection, Ti

MediaPipe is a an open-source framework from Google for building multimodal (eg. video, audio, any time series data), cross platform (i.e Android, iOS, web, edge devices) applied ML pipelines. It is performance optimized with end-to-end on device inference in mind.

History Aware Multimodal Transformer for Vision-and-Language Navigation This repository is the official implementation of History Aware Multimodal Tra

NLOS-OT Official implementation of NLOS-OT: Passive Non-Line-of-Sight Imaging Using Optimal Transport (IEEE TIP, accepted) Description In this reposit

AutomaticUSnavigation Investigating automatic navigation towards standard US views integrating MARL with the virtual US environment developed in CT2US

Just Ask: Learning to Answer Questions from Millions of Narrated Videos Webpage • Demo • Paper This repository provides the code for our paper, includ

Equivariant Imaging: Learning Beyond the Range Space Equivariant Imaging: Learning Beyond the Range Space Dongdong Chen, Julián Tachella, Mike E. Davi

meddlr Getting Started Meddlr is a config-driven ML framework built to simplify medical image reconstruction and analysis problems. Installation To av

fly2p Tools for analyzing two-photon (2p) imaging data collected with Vidrio Scanimage software and micromanger. Loading scanimage data relies on scan

METER Code and pre-trained models will be publicized soon. Citation @article{dou2021meter, title={An Empirical Study of Training End-to-End Vision-a

Benchmarking Multimodal AutoML for Tabular Data with Text Fields Repository for the NeurIPS 2021 Dataset Track Submission "Benchmarking Multimodal Aut

CFN-SR A CROSS-MODAL FUSION NETWORK BASED ON SELF-ATTENTION AND RESIDUAL STRUCTURE FOR MULTIMODAL EMOTION RECOGNITION The audio-video based multimodal

ML-PersRef This repository has python code (in jupyter notebooks) for both of the following papers: ML-PersRef: A Machine Learning-based Personalized

scikit-multimodallearn is a Python package implementing algorithms multimodal data. It is compatible with scikit-learn, a popul

Multimodal Temporal Context Network (MTCN) This repository implements the model proposed in the paper: Evangelos Kazakos, Jaesung Huh, Arsha Nagrani,

Neural Nano-Optics for High-quality Thin Lens Imaging Project Page | Paper | Data Ethan Tseng, Shane Colburn, James Whitehead, Luocheng Huang, Seung-H

Non-Imaging Transient Reconstruction And TEmporal Search (NITRATES) This repo contains the full NITRATES pipeline for maximum likelihood-driven discov

How to Leverage Multimodal EHR Data for Better Medical Predictions? This repository contains the code of the paper: How to Leverage Multimodal EHR Dat

MedMNIST Project (Website) | Dataset (Zenodo) | Paper (arXiv) | MedMNIST v1 (ISBI'21) Jiancheng Yang, Rui Shi, Donglai Wei, Zequan Liu, Lin Zhao, Bili

ngEHTexplorer An interactive tool with which to explore the possible imaging performance of candidate ngEHT architectures. Welcome! ngEHTexplorer is a

MultiMix This repository contains the implementation of MultiMix. Our publications for this project are listed below: "MultiMix: Sparingly Supervised,

trimodal_person_verification This repository contains the code, and preprocessed dataset featured in "A Study of Multimodal Person Verification Using

CoVA: Context-aware Visual Attention for Webpage Information Extraction Abstract Webpage information extraction (WIE) is an important step to create k

OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data Christoph Reich, Tim Prangemeier, Özdemir Cetin & Heinz Koeppl | Pr

OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data Christoph Reich, Tim Prangemeier, Özdemir Cetin & Heinz Koeppl | Pr

MMF is a modular framework for vision and language multimodal research from Facebook AI Research. MMF contains reference implementations of state-of-t

Pluralistic Image Completion ArXiv | Project Page | Online Demo | Video(demo) This repository implements the training, testing and editing tools for "

starfish: scalable pipelines for image-based transcriptomics starfish is a Python library for processing images of image-based spatial transcriptomics

img2texture Command line utility for converting images to seamless tiles. The resulting tiles can be used as textures in games, compositing and 3D mod

MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.

MUSCO - Multimodal Descriptions of Social Concepts Automatic Modeling of (Highly Abstract) Social Concepts evoked by Art Images This project aims to i

FLAME Original Pytorch Implementation of FLAME: Facial Landmark Heatmap Activated Multimodal Gaze Estimation, accepted at the 17th IEEE Internation Co

AdaMML: Adaptive Multi-Modal Learning for Efficient Video Recognition [ArXiv] [Project Page] This repository is the official implementation of AdaMML:

Useful materials and tutorials for 110-1 NTU DBME5028 (Application of Deep Learning in Medical Imaging)

A 3D multi-modal medical image segmentation library in PyTorch We strongly believe in open and reproducible deep learning research. Our goal is to imp

Small Lesion Segmentation in Brain MRIs with Subpixel Embedding PyTorch implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedd

AlignShift NEW: Code for our new MICCAI'21 paper "Asymmetric 3D Context Fusion for Universal Lesion Detection" will also be pushed to this repository

Scientific Computational Imaging COde (SCICO) SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications

Dense Deep Unfolding Network with 3D-CNN Prior for Snapshot Compressive Imaging, ICCV2021 [PyTorch Code]

WIT (Wikipedia-based Image Text) Dataset is a large multimodal multilingual dataset comprising 37M+ image-text sets with 11M+ unique images across 100+ languages.

Pillow Python Imaging Library (Fork) Pillow is the friendly PIL fork by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lund

bartpy Python bindings for BART. Overview This repo contains code to generate an updated Python wrapper for the Berkeley Advance Reconstruction Toolbo

Mask-RCNN on Mycobacterium tuberculosis This is an example of object detection on Mycobacterium Tuberculosis using Mask RCNN. Implement of Mask R-CNN

Pre-trained (foundation) models across tasks (understanding, generation and translation), languages (100+ languages), and modalities (language, image, audio, vision + language, audio + language, etc.)

Mask-RCNN on Mycobacterium tuberculosis This is an example of object detection on Mycobacterium Tuberculosis using Mask RCNN. Implement of Mask R-CNN

img2dataset Easily turn large sets of image urls to an image dataset. Can download, resize and package 100M urls in 20h on one machine. Also supports

WobblyStitcher Introduction A scalable implementation of WobblyStitcher Dependencies $ python -m pip install numpy scikit-image Visualization ImageJ

Medical image preprocessing and augmentation toolkit for deep learning. Part of the PyTorch Ecosystem.

MultiModal-InfoMax This repository contains the official implementation code of the paper Improving Multimodal Fusion with Hierarchical Mutual Informa

Vision Guided Generative Pre-trained Language Models for Multimodal Abstractive Summarization [Paper] accepted at the EMNLP 2021: Vision Guided Genera

Multimodal Deep Learning 🎆 🎆 🎆 Announcing the multimodal deep learning repository that contains implementation of various deep learning-based model

CLIP Guided Diffusion From RiversHaveWings. Generate vibrant and detailed images using only text. See captions and more generations in the Gallery See

Towers of Babel: Combining Images, Language, and 3D Geometry for Learning Multimodal Vision Download links and PyTorch implementation of "Towers of Ba

FairyTailor: Multimodal Generative Framework for Storytelling

ml4h is a toolkit for machine learning on clinical data of all kinds including genetics, labs, imaging, clinical notes, and more

Deep Optics for Single-shot High-dynamic-range Imaging Code associated with the paper "Deep Optics for Single-shot High-dynamic-range Imaging" CVPR, 2

NCRF Prerequisites Data Whole slide images Annotations Patch images Model Training Testing Tissue mask Probability map Tumor localization FROC evaluat

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening Introduction This is an implementation of the model used for breast

UNet for segmenting salt deposits from seismic images with PyTorch. General We, tugstugi and xuyuan, have participated in the Kaggle competition TGS S

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

This repo holds the code to perform experiments with the multimodal autoregressive probabilistic model Transflower. Overview of the repo It is structu

What is nnDetection? Simultaneous localisation and categorization of objects in medical images, also referred to as medical object detection, is of hi

CLIP (Contrastive Language–Image Pre-training) Experiments (Evaluation) Model Dataset Acc (%) ViT-B/32 (Paper) CIFAR100 65.1 ViT-B/32 (Our) CIFAR100 6

The Second Situated Interactive MultiModal Conversations (SIMMC 2.0) Challenge 2021 Welcome to the Second Situated Interactive Multimodal Conversation

Unified Multimodal Transformer (UMT) for Multimodal Named Entity Recognition (MNER) Two MNER Datasets and Codes for our ACL'2020 paper: Improving Mult

Episodic Transformers (E.T.) Episodic Transformer for Vision-and-Language Navigation Alexander Pashevich, Cordelia Schmid, Chen Sun Episodic Transform

merlot MERLOT: Multimodal Neural Script Knowledge Models MERLOT is a model for learning what we are calling "neural script knowledge" -- representatio

CoMIR: Contrastive Multimodal Image Representation for Registration Framework 🖼 Registration of images in different modalities with Deep Learning 🤖

MusCaps: Generating Captions for Music Audio Ilaria Manco1 2, Emmanouil Benetos1, Elio Quinton2, Gyorgy Fazekas1 1 Queen Mary University of London, 2

MMF is a modular framework for vision and language multimodal research from Facebook AI Research. MMF contains reference implementations of state-of-t

Combining Events and Frames using Recurrent Asynchronous Multimodal Networks for Monocular Depth Prediction This is the code for the paper Combining E

The implementation of paper CLIP4Clip: An Empirical Study of CLIP for End to End Video Clip Retrieval. CLIP4Clip is a video-text retrieval model based

PyKale is a PyTorch library for multimodal learning and transfer learning as well as deep learning and dimensionality reduction on graphs, images, texts, and videos. By adopting a unified pipeline-based API design, PyKale enforces standardization and minimalism, via reusing existing resources, reducing repetitions and redundancy, and recycling learning models across areas.

XDVioDet Official implementation of "Not only Look, but also Listen: Learning Multimodal Violence Detection under Weak Supervision" ECCV2020. The proj

MultiResUNet Rethinking the U-Net architecture for multimodal biomedical image segmentation This repository contains the original implementation of "M

Welcome to MedicalTorch MedicalTorch is an open-source framework for PyTorch, implementing an extensive set of loaders, pre-processors and datasets fo

CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT CheXbert is an accurate, automated dee

Domain Generalization for Medical Imaging Classification with Linear Dependency Regularization The code release of paper 'Domain Generalization for Me

MMNas: Deep Multimodal Neural Architecture Search This repository corresponds to the PyTorch implementation of the MMnas for visual question answering

Diverse Structure Inpainting ArXiv | Papar | Supplementary Material | BibTex This repository is for the CVPR 2021 paper, "Generating Diverse Structure

TransBTS: Multimodal Brain Tumor Segmentation Using Transformer This repo is the official implementation for TransBTS: Multimodal Brain Tumor Segmenta

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

Medical-Transformer Pytorch Code for the paper "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" About this repo: This repo

Meshroom is a free, open-source 3D Reconstruction Software based on the AliceVision Photogrammetric Computer Vision framework. Learn more details abou

Multimodal Reinforcement Learning JAX implementations of the following multimodal reinforcement learning approaches. Dual-coding Episodic Memory from

DALL-E in Mesh-Tensorflow [WIP] Open-AI's DALL-E in Mesh-Tensorflow. If this is similarly efficient to GPT-Neo, this repo should be able to train mode

Cornac Cornac is a comparative framework for multimodal recommender systems. It focuses on making it convenient to work with models leveraging auxilia

Documentation: https://raamana.github.io/neuropredict/ News As of v0.6, neuropredict now supports regression applications i.e. predicting continuous t

nilearn Nilearn enables approachable and versatile analyses of brain volumes. It provides statistical and machine-learning tools, with instructive doc

Pillow Python Imaging Library (Fork) Pillow is the friendly PIL fork by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lund