Python Nlp-medical-abstract-pubmed-rct Resources

Toward Model Interpretability in Medical NLP LING380: Topics in Computational Linguistics Final Project James Cross ([email protected]) and Daniel Kim

Wikipedia-Utils: Preprocessing Wikipedia Texts for NLP This repository maintains some utility scripts for retrieving and preprocessing Wikipedia text

BERTopic BERTopic is a topic modeling technique that leverages 🤗 transformers and c-TF-IDF to create dense clusters allowing for easily interpretable

This repo supplements our Survey on Transformers in Medical Imaging Fahad Shamshad, Salman Khan, Syed Waqas Zamir, Muhammad Haris Khan, Munawar Hayat,

Introduction: X-Ray Report Generation This repository is for our EMNLP 2021 paper "Automated Generation of Accurate & Fluent Medical X-ray Reports". O

RATCHET: RAdiological Text Captioning for Human Examined Thoraxes RATCHET is a Medical Transformer for Chest X-ray Diagnosis and Reporting. Based on t

Is it Time to Replace CNNs with Transformers for Medical Images? Accepted at ICCV-2021: Workshop on Computer Vision for Automated Medical Diagnosis (C

MT-UNet Update 2022/01/05 By another round of training based on previous weights, our model also achieved a better performance on ACDC (91.61% DSC). W

LeViT_UNet For medical image segmentation Our model is based on LeViT (https://github.com/facebookresearch/LeViT). You'd better gitclone its codes. Th

TransFuse This repo holds the code of TransFuse: Fusing Transformers and CNNs for Medical Image Segmentation Requirements Pytorch=1.6.0, 1.9.0 (=1.

Introduction This repository contains the modified caffe library and network architectures for our paper "Automated Melanoma Recognition in Dermoscopy

Cascaded-FCN This repository contains the pre-trained models for a Cascaded-FCN in caffe and tensorflow that segments the liver and its lesions out of

Medical Data for Machine Learning This is a curated list of medical data for machine learning. This list is provided for informational purposes only,

Stanford CoreNLP Stanford CoreNLP provides a set of natural language analysis tools written in Java. It can take raw human language text input and giv

HistoSeg : Quick attention with multi-loss function for multi-structure segmentation in digital histology images Histological Image Segmentation This

Japanese NLP Library Back to Home Contents 1 Requirements 1.1 Links 1.2 Install 1.3 History 2 Libraries and Modules 2.1 Tokenize jTokenize.py 2.2 Cabo

SI_EXPLAINER_tg_bot This bot is an assistant for medical professionals in interpreting the results of patient clustering. ABOUT This chatbot was devel

Starter code: Kaggle Toxic Comment Classification Challenge More competitions 🎇 Check collection of public projects 🎁 , where you can find multiple

Deep learning Udacity Course Deep Learning Topics with Computer Vision & NLP for the AWS Machine Learning Engineer Nanodegree Program Tasks are mostly

Blackstone Blackstone is a spaCy model and library for processing long-form, unstructured legal text. Blackstone is an experimental research project f

GNES is Generic Neural Elastic Search, a cloud-native semantic search system based on deep neural network.

Prompt Tuning This is the code to reproduce the experiments from the EMNLP 2021 paper "The Power of Scale for Parameter-Efficient Prompt Tuning" (Lest

T‘rex Park is a Youzan sponsored project. Offering Chinese NLP and image models pretrained from E-commerce datasets (product titles, images, comments, etc.).

TweebankNLP This repo contains the new Tweebank-NER dataset and Twitter-Stanza p

Applying BERT Fine Tuning to Sentiment Classification on Amazon Reviews Abstract Sentiment analysis has made great progress in recent years, due to th

Twitter-NLP-Analysis Business Problem I got last @turk_politika 3000 tweets with

A set of Python codes for the generation of biomedical ontologies from the MeSH keywords of the PubMed scholarly publications

MedViLL This repository provides the code for MedViLL(Medical Vision Language Learner). Our proposed architecture MedViLL is a single BERT-based model

Trabalho da disciplina de BI NLP Repositório do trabalho da disciplina Introdução a Processamento de Linguagem Natural da pós BI-Master da PUC-RIO. Eq

Hello, This Notebook Contains Example of Corona Virus Tweets Multi Class Classification. - Classes is: Extremely Positive, Positive, Extremely Negativ

NLP PubMed Medical Research Paper Abstract (Randomized Controlled Trial) A natural language processing model for sequential sentence classification in

YouTokenToMe YouTokenToMe is an unsupervised text tokenizer focused on computational efficiency. It currently implements fast Byte Pair Encoding (BPE)

Making Emojis More Predictable by Karan Abrol, Karanjot Singh and Pritish Wadhwa, Natural Language Processing (CSE546) under the guidance of Dr. Shad

Disease detection API for MediSearch An API that uses NLP and AI to let you predict possible diseases and symptoms based on a prompt of what you're fe

A simple Flask site that allows users to create, update, and delete posts in a database, as well as perform basic NLP tasks on the posts.

NLP: SLU tagging

Pneumonia Detection from X-Rays Project Overview In this project, you will apply the skills that you have acquired in this 2D medical imaging course t

Patient Selection for Diabetes Drug Testing Project Overview EHR data is becoming a key source of real-world evidence (RWE) for the pharmaceutical ind

Quantifying Hippocampus Volume for Alzheimer's Progression Background Alzheimer's disease (AD) is a progressive neurodegenerative disorder that result

Cross-level Contrastive Learning and Consistency Constraint for Semi-supervised Medical Image Introduction This repository contains the PyTorch implem

auto_code_complete v1.3 purpose and usage auto_code_complete is a auto word-completetion program which allows you to customize it on your needs. the m

TDEER 🦌 🦒 Official Code For TDEER: An Efficient Translating Decoding Schema for Joint Extraction of Entities and Relations (EMNLP2021) Overview TDEE

Lbl2Vec Lbl2Vec is an algorithm for unsupervised document classification and unsupervised document retrieval. It automatically generates jointly embed

1. What does this library do? Its task is simple: It tells you which language some provided textual data is written in. This is very useful as a prepr

Machine Learning use case in the field of Healthcare. In this project MONAI and pytorch frameworks are used for 3D Liver segmentation.

Sentiment-Analysis and EDA on the IMDB Movie Review Dataset The main part of the work focuses on the exploration and study of different approaches whi

Are you looking for X-as-service? Try the Cloud-Native Neural Search Framework for Any Kind of Data bert-as-service Using BERT model as a sentence enc

Introduction This is an implementation of our paper Supervised 3D Pre-training on Large-scale 2D Natural Image Datasets for 3D Medical Image Analysis.

HuSpaCy: Industrial-strength Hungarian NLP HuSpaCy is a spaCy model and a library providing industrial-strength Hungarian language processing faciliti

Repository for papers: Benchmark: Effect of Prior-based Losses on Segmentation Performance: A Benchmark Midl: A Surprisingly Effective Perimeter-based

twitter-sentiment-analysis Explore the relationship between twitter sentiment of Tesla and its stock price/return. Explore the effect of different BER

NLP Best Practices In recent years, natural language processing (NLP) has seen quick growth in quality and usability, and this has helped to drive bus

Natural Language Processing with PyTorch Build Intelligent Language Applications Using Deep Learning By Delip Rao and Brian McMahan Welcome. This is a

NLP-Models-Tensorflow, Gathers machine learning and tensorflow deep learning models for NLP problems, code simplify inside Jupyter Notebooks 100%. Tab

text to keywords Trained T5-base and T5-large model for creating keywords from text. Supported languages: ru Pretraining Large version | Pretraining B

auto_code_complete is a auto word-completetion program which allows you to customize it on your needs. the model for this program is one of the deep-learning NLP(Natural Language Process) model structure called 'GRU(gated recurrent unit)'.

CrowdCurio Time Series Annotator Library The CrowdCurio Time Series Annotation Library implements classification tasks for time series. Features Suppo

Medical Appointments No-shows Why do 20% of patients miss their scheduled appointments? A person makes a doctor appointment, receives all the instruct

abcmeta Python meta class and abstract method library with restrictions. This library provides a restricted way to validate abstract methods. The Pyth

CheckList This repository contains code for testing NLP Models as described in the following paper: Beyond Accuracy: Behavioral Testing of NLP models

The CodeSearchNet challenge has been concluded We would like to thank all participants for their submissions and we hope that this challenge provided

Jupyter Notebook tutorials on solving real-world problems with Machine Learning & Deep Learning using PyTorch. Topics: Face detection with Detectron 2, Time Series anomaly detection with LSTM Autoencoders, Object Detection with YOLO v5, Build your first Neural Network, Time Series forecasting for Coronavirus daily cases, Sentiment Analysis with BERT.

Learn how to process, classify, cluster, summarize, understand syntax, semantics and sentiment of text data with the power of Python! This repository contains code and datasets used in my book, Text Analytics with Python published by Apress/Springer.

Mycroft Mycroft is a hackable open source voice assistant. Table of Contents Getting Started Running Mycroft Using Mycroft Home Device and Account Man

NLP Tutorial A list of NLP(Natural Language Processing) tutorials built on PyTorch. Table of Contents A step-by-step tutorial on how to implement and

Chinese Medical Entity Recognition Based on BERT+Bi-LSTM+CRF Step 1 I share the dataset on my google drive, please download the whole 'CCKS_2019_Task1

One Pixel Attack How simple is it to cause a deep neural network to misclassify an image if an attacker is only allowed to modify the color of one pix

GPT2-Chinese Description Chinese version of GPT2 training code, using BERT tokenizer or BPE tokenizer. It is based on the extremely awesome repository

This file contains the following documents sumbited for Baruch CIS9665 group 9 fall 2021. 1. Dataset: drug_reviews.csv 2. python codes for text classi

Project Insight NLP as a Service Contents Introduction Features Installation Setup and Documentation Project Details Demonstration Directory Details H

Headliner Demo This is a demo showcasing our Headliner package. In particular, we trained a simple seq2seq model on an English-German dataset. We didn

Local development Create a conda virtual environment and activate it: conda env create --file environment.yml conda activate rhyme-with-ai Install the

Auto Vaidya An open source solution for creating end-end web app for employing the power of deep learning in various clinical scenarios like implant d

Leetcode using AI 🤖 GPT-2 Model for Leetcode Questions in python New demo here: https://huggingface.co/spaces/gagan3012/project-code-py Note: the Ans

spacy-streamlit: spaCy building blocks for Streamlit apps This package contains utilities for visualizing spaCy models and building interactive spaCy-

Two-Stage Text Summarization Description We experiment with a 2-stage summarization model on CNN/DailyMail dataset that combines the ability to filter

SemEval 2021 Task 5: Toxic Spans Detection: Task: Link to SemEval-2021: Task 5 Toxic Span Detection is https://competitions.codalab.org/competitions/2

Say As You Wish: Fine-grained Control of Image Caption Generation with Abstract Scene Graphs This repository contains PyTorch implementation of our pa

Awesome-Visual-Captioning Table of Contents ACL-2021 CVPR-2021 AAAI-2021 ACMMM-2020 NeurIPS-2020 ECCV-2020 CVPR-2020 ACL-2020 AAAI-2020 ACL-2019 NeurI

Project 3: Web APIs & NLP Problem Statement How do r/Libertarian and r/Neoliberal differ on Biden post-inaguration? The goal of the project is to see

Coursera Natural Language Processing Specialization This repository contains material related to Coursera Natural Language Processing Specialization.

Awesome Artificial Intelligence, Machine Learning and Deep Learning as we learn it. Study notes and a curated list of awesome resources of such topics.

Speech Emotion Analyzer The idea behind creating this project was to build a machine learning model that could detect emotions from the speech we have

KoBERT KoBERT Korean BERT pre-trained cased (KoBERT) Why'?' Training Environment Requirements How to install How to use Using with PyTorch Using with

NLP T5 Project proposal Topic Modeling and Clustering of News-Articles-and-Essays Students: Nasser Alshehri Abdullah Bushnag Abdulrhman Alqurashi OVER

Conversational AI ChatBot Intelligent ChatBot built with Microsoft's DialoGPT transformer to make conversations with human users! In this project? Thi

Book Recommendation System A recommendation system for suggesting new books given similar books. Datasets Dataset Kaggle Dataset Notebooks goodreads-E

Medical-Insurance-Cost-Prediction-using-Machine-learning - Here in this project, I will use regression analysis to predict medical insurance cost for people in different regions, and based on several aspects like : Smoking, Number of children, BMI...etc.

Search Engine AI based search engine that was trained on 25000 samples, feel free to train on up to 1.2M sample from kaggle dataset, link below StackS

A list of NLP(Natural Language Processing) tutorials built on Tensorflow 2.0.

VAST VAST - Visualise Abstract Syntax Trees for Python. VAST generates ASTs for a given Python script and builds visualisations of them. Install Insta

Natural Language Processing for Adverse Drug Reaction (ADR) Detection This repo contains code from a project to identify ADRs in discharge summaries a

Visualize, analyze, and explore NLP language models. Ecco creates interactive visualizations directly in Jupyter notebooks explaining the behavior of Transformer-based language models (like GPT2, BERT, RoBERTA, T5, and T0).

CVParser Python library for parsing resumes using natural language processing and machine learning. Setup Installation on Linux and Mac OS Follow the

СоАвтор СоАвтор – платформа и открытый набор инструментов для редакций и журналистов-фрилансеров, который призван сделать процесс создания контента ма

Multi-Image vqa @authors: Akhilesh, Janhavi, Harsh Paper summary, Ideas tried and their corresponding results: on wiki Other discussions: on discussio

Contrastive learning of global and local features for medical image segmentation with limited annotations The code is for the article "Contrastive lea

Develop open-source Python Arabic NLP libraries that the Arab world will easily use in all Natural Language Processing applications

txtai: Build AI-powered semantic search applications in Go txtai executes machine-learning workflows to transform data and build AI-powered semantic s

Embeddings Embeddings is a python package that provides pretrained word embeddings for natural language processing and machine learning. Instead of lo