Python Single-cell-analysis Resources

Single-Stage Instance Shadow Detection with Bidirectional Relation Learning (CVPR 2021 Oral) Tianyu Wang*, Xiaowei Hu*, Chi-Wing Fu, and Pheng-Ann Hen

wcc_analysis Lichess page documentation: https://lichess.org/page/world-championships Each WCC has a study, studies are fetched using: https://lichess

Latent Semantic Analysis Pipeline for training LSA models using Scikit-Learn. Usage Instead of writing custom code for latent semantic analysis, you j

A single model that parses Universal Dependencies across 75 languages. Given a sentence, jointly predicts part-of-speech tags, morphology tags, lemmas, and dependency trees.

Gradient Cached Dense Passage Retrieval Gradient Cached Dense Passage Retrieval (GC-DPR) - is an extension of the original DPR library. We introduce G

MonoScene: Monocular 3D Semantic Scene Completion MonoScene: Monocular 3D Semantic Scene Completion] [arXiv + supp] | [Project page] Anh-Quan Cao, Rao

CLIPstyler Official Pytorch implementation of "CLIPstyler:Image Style Transfer with a Single Text Condition" Environment Pytorch 1.7.1, Python 3.6 $ c

ts2vg: Time series to visibility graphs The Python ts2vg package provides high-performance algorithm implementations to build visibility graphs from t

SEAS Student Enrollment Analysis System Steps to start working: create a user name "seas", host name: local, password: seas, mark all checkbox - go C

BERT Attention Analysis This repository contains code for What Does BERT Look At? An Analysis of BERT's Attention. It includes code for getting attent

Norm-based Analysis of Transformer Implementations for 2 papers introducing to analyze Transformers using vector norms: Kobayashi+'20 Attention is Not

The Stem Cell Hypothesis Codes for our paper The Stem Cell Hypothesis: Dilemma behind Multi-Task Learning with Transformer Encoders published to EMNLP

#Sentic GCN Introduction This repository was used in our paper: Aspect-Based Sentiment Analysis via Affective Knowledge Enhanced Graph Convolutional N

clustimage The aim of clustimage is to detect natural groups or clusters of images. Image recognition is a computer vision task for identifying and ve

Multipath-Load-Balancing Method of managing incoming traffic by distributing and sharing load fairly among multiple routes from source to destination

Group and Section Group 36 Section 001 name and UNI Name UNI Ningyu Jia nj2459 Mengyin Ma mm5937 code explanation Parking.py (1) Calculate the rate of

Threagile is an open-source toolkit for agile threat modeling:

HAABSAStar Code for "Adversarial Training for a Hybrid Approach to Aspect-Based Sentiment Analysis". This project builds on the code from https://gith

dispersion-score Official implementation of 3DV 2021 Paper A Dataset-dispersion Perspective on Reconstruction versus Recognition in Single-view 3D Rec

Estimating Multi-cause Treatment Effects via Single-cause Perturbation (NeurIPS 2021) Single-cause Perturbation (SCP) is a framework to estimate the m

BEAR Overview This repository contains code associated with the preprint A generative nonparametric Bayesian model for whole genomes (2021), which pro

PyTCI A toolbox that estimates the integration window of a sensory response using the "Temporal Context Invariance" paradigm (TCI). The TCI method Int

Deep Markov Factor Analysis (DMFA) Codes and experiments for deep Markov factor analysis (DMFA) model accepted for publication at NeurIPS2021: A. Farn

Hyperbolic Procrustes Analysis Using Riemannian Geometry The code in this repository creates the figures presented in this article: Please notice that

MatrixProfile MatrixProfile is a Python 3 library, brought to you by the Matrix Profile Foundation, for mining time series data. The Matrix Profile is

pysot-toolkit The purpose of this repo is to provide evaluation API of Current Single Object Tracking Dataset, including VOT2016 VOT2018 VOT2018-LT OT

CRISP: Critical Path Analysis of Microservice Traces This repo contains code to compute and present critical path summary from Jaeger microservice tra

VaccineEfficiency 💉 An analysis of the efficiency of the COVID-19 vaccine 3 Methods 1️⃣ Compare country's vaccination data to number of day- to-day c

COIN Dataset COIN is the currently largest dataset for comprehensive instruction video analysis. It contains 11,827 videos of 180 different tasks (i.e

NTIRE2017 Super-resolution Challenge: SNU_CVLab Introduction This is our project repository for CVPR 2017 Workshop (2nd NTIRE). We, Team SNU_CVLab, (B

LAMA: LAnguage Model Analysis LAMA is a probe for analyzing the factual and commonsense knowledge contained in pretrained language models. The dataset

Welcome to the CSIRO Face Analysis SDK. Documentation for the SDK can be found in doc/documentation.html. All code in this SDK is provided according t

PENecro This project is based on "Enabling dynamic analysis of Legacy Embedded Systems in full emulated environment", published on hardwear.io USA 202

Ping Pong Project The objective of this project was to determine the moment of impact of the ball with the ground. To do this, we used different model

Subspace Adversarial Training Single-step adversarial training (AT) has received wide attention as it proved to be both efficient and robust. However,

Enhancing Aspect-Based Sentiment Analysis with Supervised Contrastive Learning. This repo contains the PyTorch code and implementation for the paper E

Enhancing Aspect-Based Sentiment Analysis with Supervised Contrastive Learning. Enhancing Aspect-Based Sentiment Analysis with Supervised Contrastive

Douglas-Quaid Project Open source software for image correlation, distance and analysis. Strongly related to : Carl-Hauser Problem statement (@CIRCL)

Python asymptotic Partial Directed Coherence and Directed Coherence estimation package for brain connectivity analysis. Free software: MIT license Doc

MMDA - multimodal document analysis

awesome-causality-algorithms An index of algorithms for learning causality with data. Please cite our survey paper if this index is helpful. @article{

PyConverse Let me try first Installation pip install pyconverse Usage Please try this notebook that demos the core functionalities: basic usage noteb

SinGAN Project | Arxiv | CVF | Supplementary materials | Talk (ICCV`19) Official pytorch implementation of the paper: "SinGAN: Learning a Generative M

Lazarus Research This repository publishes analysis reports and analysis tools for Operation Dream Job and Operation JTrack for Lazarus. Tools Python

Sea Level Predictor Assignment You will anaylize a dataset of the global average sea level change since 1880. You will use the data to predict the sea

ltempy ltempy is a set of tools for Lorentz TEM data analysis, simulation, and presentation. Features Single Image Transport of Intensity Equation (SI

Aspect-Based-Sentiment-Analysis A paper list for aspect based sentiment analysis. Survey [IEEE-TAC-20]: Issues and Challenges of Aspect-based Sentimen

This repro introcudes the Waveform Analysis Language (WAL). The initial paper on WAL will appear at ASPDAC'22 and can be downloaded here: https://www.

SSC-GAN_repo Pytorch implementation for 'Semi-Supervised Single-Stage Controllable GANs for Conditional Fine-Grained Image Generation'.PDF SSC-GAN:Sem

A Python API for Intelligent Visual Discovery Lux is a Python library that facilitate fast and easy data exploration by automating the visualization a

Intel(R) Extension for Scikit-learn* Installation | Documentation | Examples | Support | FAQ With Intel(R) Extension for Scikit-learn you can accelera

This repository contains the official implementation code of the paper Transformer-based Feature Reconstruction Network for Robust Multimodal Sentiment Analysis, accepted at ACMMM 2021.

PySlayer An single python server emulator of MMORPG game WindSlayer also known as WS1. Requirements Python = 3.7 Old windslayer client (Korea Yahoo!

Modeling Temporal Concept Receptive Field Dynamically for Untrimmed Video Analysis This is a PyTorch implementation of the model described in our pape

Pruning Self-attentions into Convolutional Layers in Single Path This is the official repository for our paper: Pruning Self-attentions into Convoluti

Deep Residual Fourier Transformation for Single Image Deblurring Xintian Mao, Yiming Liu, Wei Shen, Qingli Li and Yan Wang code will be released soon

English | 简体中文 Documentation: https://mmtracking.readthedocs.io/ Introduction MMTracking is an open source video perception toolbox based on PyTorch.

Minimal Hand A minimal solution to hand motion capture from a single color camera at over 100fps. Easy to use, plug to run. This project provides the

Riskfolio-Lib Quantitative Strategic Asset Allocation, Easy for Everyone. Description Riskfolio-Lib is a library for making quantitative strategic ass

Web scraped S&P 500 Data from Wikipedia using Pandas and performed Exploratory Data Analysis on the data. Then used Yahoo Finance to get the related stock data and displayed them in the form of charts.

Pruning Self-attentions into Convolutional Layers in Single Path This is the official repository for our paper: Pruning Self-attentions into Convoluti

Fine-grained Sentiment Analysis as Dependency Graph Parsing This repository contains the code and datasets described in following paper: Fine-grained

This repository contains tools to simulate the ground filtering process of a registered point cloud. The repository contains two filtering methods. The first method uses a normal vector, and fit to plane. The second method utilizes voxel adjacency, and fit to plane.

Does Oversizing Improve Prosumer Profitability in a Flexibility Market? - A Sensitivity Analysis using PV-battery System The possibilities to involve

zEpid zEpid is an epidemiology analysis package, providing easy to use tools for epidemiologists coding in Python 3.5+. The purpose of this library is

Python-for-Epidemiologists This repository is an introduction to epidemiology analyses in Python. Additionally, the tutorials for my library zEpid are

Explorative Data Analysis Get data into a usable format! Find out if the following predictive modeling phase will be successful! Combine everything in

Kaggler is a Python package for lightweight online machine learning algorithms and utility functions for ETL and data analysis. It is distributed under the MIT License.

MCML is a toolkit for semi-supervised dimensionality reduction and quantitative analysis of Multi-Class, Multi-Label data. We demonstrate its use

pl_prompt_sst An example project using OpenPrompt under the framework of pytorch-lightning for a training prompt-based text classification model on SS

A synchronous, single-threaded interface for starting processes on Linux

Expressive Body Capture: 3D Hands, Face, and Body from a Single Image [Project Page] [Paper] [Supp. Mat.] Table of Contents License Description Fittin

Prince is a library for doing factor analysis. This includes a variety of methods including principal component analysis (PCA) and correspondence anal

giotto-tda is a high-performance topological machine learning toolbox in Python built on top of scikit-learn and is distributed under the G

Scanpy – Single-Cell Analysis in Python Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It inc

Falcon: Interactive Visual Analysis for Big Data Crossfilter millions of records without latencies. This project is work in progress and not documente

Welcome to Streamlit 👋 The fastest way to build and share data apps. Streamlit lets you turn data scripts into sharable web apps in minutes, not week

Introduction to Geospatial Analysis in Python This repository is in support of a talk on geospatial data. Data To recreate all of the examples, the da

Infomap Infomap is a network clustering algorithm based on the Map equation. For detailed documentation, see mapequation.org/infomap. For a list of re

Tensor Component Analysis for Interpreting the Latent Space of GANs [ paper | project page ] Code to reproduce the results in the paper "Tensor Compon

Stock and Index Beta Calculator Python script that calculates the beta (β) of a stock against the chosen index. The script retrieves the data and resa

KXY: A Seemless API to 10x The Productivity of Machine Learning Engineers Documentation https://www.kxy.ai/reference/ Installation From PyPi: pip inst

Detectron2 trained on PubLayNet dataset This repo contains the training configurations, code and trained models trained on PubLayNet dataset using Det

Python Blood Vessel Topology Analysis This repository is not being updated anymore. The new version of PyVesTo is called PyVaNe and is available at ht

Emotion Recognition in Conversations Updates 🔥 🔥 🔥 Date Announcements 03/08/2021 🎆 🎆 We have released a new dataset M2H2: A Multimodal Multiparty

'db' within pydantic - A single model for shaping, creating, accessing, storing data within a Database Key Features Integrated Redis Caching Support A

This is a tool to help you quickly solve classification problems including: data analysis, training, report results and model explanation.

Scripts for "Current best-practices in single-cell RNA-seq: a tutorial" This repository is complementary to the publication: M.D. Luecken, F.J. Theis,

Cellpose | A generalist algorithm for cell and nucleus segmentation. Cellpose was written by Carsen Stringer and Marius Pachitariu. To learn about Cel

Youtube video details analyser Steps to run this project Please set the AuthKey which you can fetch from google developer console and paste it in the

zeus is a Python implementation of the Ensemble Slice Sampling method. Fast & Robust Bayesian Inference, Efficient Markov Chain Monte Carlo (MCMC), Bl

Face Recognition: Too Bias, or Not Too Bias? Robinson, Joseph P., Gennady Livitz, Yann Henon, Can Qin, Yun Fu, and Samson Timoner. "Face recognition:

Predicting Yelp Review Quality Table of Contents Introduction Motivation Goal and Central Questions The Data Data Storage and ETL EDA Data Pipeline Da

ORCCA Optimal Randomized Canonical Correlation Analysis This project is for the python version of ORCCA algorithm. It depends on Numpy for matrix calc

By Investors, For Investors. Want to read this in Chinese? Click here Empyrial is a Python-based open-source quantitative investment library dedicated

Sentiment Analysis on Yelp's Dataset Author: Roberto Sanchez, Talent Path: D1 Group Docker Deployment: Deployment of this application can be found her

Trading Tesla with Machine Learning and Sentiment Analysis An interactive program to train a Random Forest Classifier to predict Tesla daily prices us

py_neuromodulation Click this button to run the "Tutorial ML with py_neuro" notebooks: The py_neuromodulation toolbox allows for real time capable pro

Twitter COVID-19 Sentiment Analysis Members: Christopher Bach | Khalid Hamid Fallous | Jay Hirpara | Jing Tang | Graham Thomas | David Wetherhold Pro

Conversational text Analysis using various NLP techniques