Python Single-cell-analysis Resources

Super Resolution Examples We run this script under TensorFlow 2.0 and the TensorLayer2.0+. For TensorLayer 1.4 version, please check release. 🚀 🚀 🚀

MultiChat A simple, personal chat program that runs on a single computer. No Internet, just you. Simple and Local MultiChat was created with ease of u

A Parameter-free Deep Embedded Clustering Method for Single-cell RNA-seq Data Overview Clustering analysis is widely utilized in single-cell RNA-seque

Inverse Rendering for Complex Indoor Scenes: Shape, Spatially-Varying Lighting and SVBRDF From a Single Image (Project page) Zhengqin Li, Mohammad Sha

InverseRenderNet: Learning single image inverse rendering !! Check out our new work InverseRenderNet++ paper and code, which improves the inverse rend

Nebula is an extremely-fast end-to-end interactive big data analytics solution. Nebula is designed as a high-performance columnar data storage and tabular OLAP engine.

O-CNN This repository contains the implementation of our papers related with O-CNN. The code is released under the MIT license. O-CNN: Octree-based Co

Learning 3D Part Assembly from a Single Image This repository contains a PyTorch implementation of the paper: Learning 3D Part Assembly from A Single

PIFuHD: Multi-Level Pixel-Aligned Implicit Function for High-Resolution 3D Human Digitization (CVPR 2020) News: [2020/06/15] Demo with Google Colab (i

Learning View Priors for Single-view 3D Reconstruction (CVPR 2019) This is code for a paper Learning View Priors for Single-view 3D Reconstruction by

Python package for analyzing sensor-collected human motion data

pyfma Fused multiply-add for Python. Fused multiply-add computes (x*y) + z with a single rounding. Useful for dot products, matrix multiplications, po

Social Sentiment Dash Application Live-streaming sentiment analysis application created with Python and Dash, hosted at SocialSentiment.net. Dash Tuto

Political elections, appointment, analysis and visualization in Python poli-sci-kit is a Python package for political science appointment and election

Data-viz utils 📈 Functions for data visualization in matplotlib 📚 API Can be installed using pip install dvu and then imported with import dvu. You

xMCA | Maximum Covariance Analysis in Python The aim of this package is to provide a flexible tool for the climate science community to perform Maximu

Ps: we are adding transformer model soon Text Gen 🐐 Almost State-of-the-art Text Generation library Text gen is a python library that allow you build

timemachines Autonomous, univariate, k-step ahead time-series forecasting functions assigned Elo ratings You can: Use some of the functionality of a s

Blockchain-enabled Server-less Federated Learning Repository containing the files used to reproduce the results of the publication "Blockchain-enabled

Deep Single-Image Portrait Relighting [Project Page] Hao Zhou, Sunil Hadap, Kalyan Sunkavalli, David W. Jacobs. In ICCV, 2019 Overview Test script for

Awesome Human Motion 🏃‍♀️ A curated list about human motion capture, analysis and synthesis. Contents Introduction Human Models Datasets Data Process

localChat A simple, 2-person chat program that runs on a single computer. No Internet, just you. Simple and Local This was created with ease of use in

Multi-Language-RTVC stands for Multi-Language Real Time Voice Cloning and is a Voice Cloning Tool capable of transfering speaker-specific audio featur

Automation on Legal Court Cases Review This project is to automate the case review on legal case documents and find the most critical cases using netw

About The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficien

A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.

crypto-candlesticks 📈 The goal behind this project is to facilitate downloading cryptocurrency candlestick data fast & simple. Currently only the Bit

Synchrosqueezing is a powerful reassignment method that focuses time-frequency representations, and allows extraction of instantaneous amplitudes and frequencies

Dust-model-dichotomous-performance-analysis Using a collated dataset of 90,000 dust point source observations from 9 drylands studies from around the

Stock-Market-AI-Analysis I dont mind anyone using this code but please give me credit A program that uses an API and a AI model to get info of stocks

Hist Hist is an analyst-friendly front-end for boost-histogram, designed for Python 3.7+ (3.6 users get version 2.4). See what's new. Installation You

Sentiment Analysis Sentiment analysis in computational linguistics is a general term for techniques that quantify sentiment or mood in a text. Can you

Charset Detection, for Everyone 👋 The Real First Universal Charset Detector A library that helps you read text from an unknown charset encoding. Moti

WASP2 (Currently in pre-development): Allele-specific pipeline for unbiased read mapping(WIP), QTL discovery(WIP), and allelic-imbalance analysis Requ

Aspect-Category-Opinion-Sentiment (ACOS) Quadruple Extraction This repo contains the data sets and source code of our paper: Aspect-Category-Opinion-S

pandas is a Python package that provides fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive.

phantom-types Phantom types for Python will help you make illegal states unrepresentable and avoid shotgun parsing by enabling you to practice "Parse,

pytest-mypy-testing — Plugin to test mypy output with pytest pytest-mypy-testing provides a pytest plugin to test that mypy produces a given output. A

SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration

Clustergram Visualization and diagnostics for cluster analysis Clustergram is a diagram proposed by Matthias Schonlau in his paper The clustergram: A

Towards Robust Monocular Depth Estimation: Mixing Datasets for Zero-shot Cross-dataset Transfer This repository contains code to compute depth from a

The yt Project yt is an open-source, permissively-licensed Python library for analyzing and visualizing volumetric data. yt supports structured, varia

Clustering Clustering Application in Python Using scikit-learn This repository contains the prediction of baseball metric clusters using MLB Statcast

gACSON gACSON software is to visualize, segment, and analyze the morphology of neurons in three-dimensional electron microscopy images. If you use any

SST: Single-stride Sparse Transformer This is the official implementation of paper: Embracing Single Stride 3D Object Detector with Sparse Transformer

Titanic-data-analysis This Repo is an analysis on Titanic_mod.csv This csv file contains some assumed data of the Titanic ship after sinking This full

frida-ceserver frida-based ceserver. iOS analysis is possible with Cheat Engine. Original by Dark Byte. Usage Install python library. pip install pack

AITom Introduction AITom is an open-source platform for AI driven cellular electron cryo-tomography analysis. AITom is originated from the tomominer l

Privacy-Aware Inverse RL (PRIL) Analysis Framework Code, environments, and scripts for the paper: "How Private Is Your RL Policy? An Inverse RL Based

PyPowSyBl The PyPowSyBl project gives access PowSyBl Java framework to Python developers. This Python integration relies on GraalVM to compile Java co

WEATHER FORECASTING ACROSS THE WORLD Overview Python scripts were created to visualize the weather for over 500 cities across the world at varying di

Hippolyzer Hippolyzer is a revival of Linden Lab's PyOGP library targeting modern Python 3, with a focus on debugging issues in Second Life-compatible

Data-Analysis-Report Deployed App 1. What is this app? Upload an excel/csv file and produce a summary report of the data. 2. Where to upload? How to p

pandas-datareader Up to date remote data access for pandas, works for multiple versions of pandas. Installation Install using pip pip install pandas-d

Singer is an open source standard for moving data between databases, web APIs, files, queues, and just about anything else you can think of. Th

Sound Field Analysis toolbox for Python The sound_field_analysis toolbox (short: sfa) is a Python port of the Sound Field Analysis Toolbox (SOFiA) too

MDAnalysis Repository README [*] MDAnalysis is a Python library for the analysis of computer simulations of many-body systems at the molecular scale,

Larch: Data Analysis Tools for X-ray Spectroscopy and More Documentation: http://xraypy.github.io/xraylarch Code: http://github.com/xraypy/xraylarch L

Light Field Networks Project Page | Paper | Data | Pretrained Models Vincent Sitzmann*, Semon Rezchikov*, William Freeman, Joshua Tenenbaum, Frédo Dur

Vim plugin for executing Python's optional static type checker MyPy

SST: Single-stride Sparse Transformer This is the official implementation of paper: Embracing Single Stride 3D Object Detector with Sparse Transformer

DRSAN A Dynamic Residual Self-Attention Network for Lightweight Single Image Super-Resolution Karam Park, Jae Woong Soh, and Nam Ik Cho Environments U

Automated Side Channel Analysis of Media Software with Manifold Learning Official implementation of USENIX Security 2022 paper: Automated Side Channel

TIBCO ActiveMatrix™ BusinessWorks 6.8 Docker Image Image for running a complete single-node all-in-one cluster instance of TIBCO ActiveMatrix™ Busines

unitcell Python script to generate vector graphics of an oriented lattice unit cell Examples unitcell --type hexagonal --eulers 12 23 34 --axes --crys

Timesketch Table of Contents About Timesketch Getting started Community Contributing About Timesketch Timesketch is an open-source tool for collaborat

Vega-Lite Vega-Lite provides a higher-level grammar for visual analysis that generates complete Vega specifications. You can find more details, docume

A Strong Single-Stage Baseline for Long-Tailed Problems This project provides a strong single-stage baseline for Long-Tailed Classification (under Ima

Flyte Flyte is a workflow automation platform for complex, mission-critical data, and ML processes at scale Home Page · Quick Start · Documentation ·

Pachyderm: The Data Foundation for Machine Learning Pachyderm provides the data layer that allows machine learning teams to productionize and scale th

BigGAN Audio Visualizer Description This visualizer explores BigGAN (Brock et al., 2018) latent space by using pitch/tempo of an audio file to generat

graceful-killer An extremely simple package with a single utillity class used for gracefully handling POSIX shutdown signals. Installation Use pip to

Data Analysis for First Year Laboratory at Imperial College, London. For personal reference only, and to reference in lab reports and lab books.

KoSentimentAnalysis Bert implementation for the Korean multi-class sentiment analysis 왜 한국어 감정 다중분류 모델은 거의 없는 것일까?에서 시작된 프로젝트 Environment: Pytorch, Da

Easy and secure implementation of Azure AD for your FastAPI APIs 🔒 Single- and multi-tenant support.

Hashtag segmentation is the task of automatically inserting the missing spaces between the words in a hashtag. Hashformers applies Transformer models

EmTract: Extracting Emotions from Social Media Text Tailored for Financial Contexts EmTract is a tool that extracts emotions from social media text. I

Graph WaveNet for brain network analysis This is the implementation of the Graph WaveNet model used in our manuscript: S. Wein , A. Schüller, A. M. To

Re-Scripts IA32-VMX-Helper (IDA-Script) IA32-MSR-Decoder (IDA-Script) IA32 VMX Helper It's an IDA script (Updated IA32 MSR Decoder) which helps you to

deepface Deepface is a lightweight face recognition and facial attribute analysis (age, gender, emotion and race) framework for python. It is a hybrid

PymUSAS Python Multilingual Ucrel Semantic Analysis System, it currently is a rule based token level semantic tagger which can be added to any spaCy p

PyCellID (building...) Functions to analyze Cell-ID single-cell cytometry data using python language. Dependecies for this project. attrs(=21.1.0) fo

Neuroanalysis Modular and interactive tools for analysis of neurophysiology data, with emphasis on patch-clamp electrophysiology. Functions for runnin

Hierarchical Attention Networks for Document Classification This is an implementation of the paper Hierarchical Attention Networks for Document Classi

Implementation of the ivis algorithm as described in the paper Structure-preserving visualisation of high dimensional single-cell datasets.

Image-Exif A Python script for extracting exif metadata from images. How to use? Using this script you can extract exif data from image and save in .c

django-usso Ugly single sign-on for django projects only. Do you have many django apps with different users? Do you want to use only one of those apps

Deep Residual Fourier Transformation for Single Image Deblurring Xintian Mao, Yiming Liu, Wei Shen, Qingli Li and Yan Wang News 2021.12.5 Release Deep

DeepIntegralCompton Deep Learning applied to Integral data analysis Module installation Move to the root directory of the project and execute : pip in

My Analysis of the VC4 Assembly Code from the RPI4

Scripts for BGC analysis in large MAGs and results of their application to soil metagenomes within Chernevaya Taiga RSF-funded project

Grouped SSD (GSSD) for liver lesion detection from multi-phase CT Note: the MICCAI 2018 paper only covers the multi-phase lesion detection part of thi

HTSeq DEVS: https://github.com/htseq/htseq DOCS: https://htseq.readthedocs.io A Python library to facilitate programmatic analysis of data from high-t

sklearn-evaluation Machine learning model evaluation made easy: plots, tables, HTML reports, experiment tracking, and Jupyter notebook analysis. Suppo

Pandas TA - A Technical Analysis Library in Python 3 Pandas Technical Analysis (Pandas TA) is an easy to use library that leverages the Pandas package

Feature-Engineering The functions we created are included in a script. The necessary parts for pre-processing were taken. Analysis complete. Business

GGanalysisLite计算包 这个版本的计算包追求计算速度，而GGanalysis包有着更多计算功能。 GGanalysisLite包通过卷积计算分布列，通过FFT和快速幂加速卷积计算。 测试玩家得到的排名值rank的数学意义是：与抽了同样数量五星的其他玩家相比，测试玩家花费的抽数大于等于比例

slientruss3d : Python for stable truss analysis tool Desciption slientruss3d is a python package which can solve the resistances, internal forces and

CLIPstyler Official Pytorch implementation of "CLIPstyler:Image Style Transfer with a Single Text Condition" Environment Pytorch 1.7.1, Python 3.6 $ c

SCAPT-ABSA Code for EMNLP2021 paper: "Learning Implicit Sentiment in Aspect-based Sentiment Analysis with Supervised Contrastive Pre-Training" Overvie