728 Repositories
Python solving-graph-pgg Libraries
Atomistic Line Graph Neural Network
Table of Contents Introduction Installation Examples Pre-trained models Quick start using colab JARVIS-ALIGNN webapp Peformances on a few datasets Use
Code for ICCV 2021 paper Graph-to-3D: End-to-End Generation and Manipulation of 3D Scenes using Scene Graphs
Graph-to-3D This is the official implementation of the paper Graph-to-3d: End-to-End Generation and Manipulation of 3D Scenes Using Scene Graphs | arx
🧮 Matrix Factorization for Collaborative Filtering is just Solving an Adjoint Latent Dirichlet Allocation Model after All
Accompanying source code to the paper "Matrix Factorization for Collaborative Filtering is just Solving an Adjoint Latent Dirichlet Allocation Model A
This is RFA-Toolbox, a simple and easy-to-use library that allows you to optimize your neural network architectures using receptive field analysis (RFA) and create graph visualizations of your architecture.
ReceptiveFieldAnalysisToolbox This is RFA-Toolbox, a simple and easy-to-use library that allows you to optimize your neural network architectures usin
This repo includes some graph-based CTR prediction models and other representative baselines.
Graph-based CTR prediction This is a repository designed for graph-based CTR prediction methods, it includes our graph-based CTR prediction methods: F
Security audit Python project dependencies against security advisory databases.
Security audit Python project dependencies against security advisory databases.
A Graph Neural Network Tool for Recovering Dense Sub-graphs in Random Dense Graphs.
PYGON A Graph Neural Network Tool for Recovering Dense Sub-graphs in Random Dense Graphs. Installation This code requires to install and run the graph
Translate darknet to tensorflow. Load trained weights, retrain/fine-tune using tensorflow, export constant graph def to mobile devices
Intro Real-time object detection and classification. Paper: version 1, version 2. Read more about YOLO (in darknet) and download weight files here. In
A simple version for graphfpn
GraphFPN: Graph Feature Pyramid Network for Object Detection Download graph-FPN-main.zip For training , run: python train.py For test with Graph_fpn
This is the official Pytorch-version code of FlatGCN (Flattened Graph Convolutional Networks for Recommendation).
FlatGCN This is the official Pytorch-version code of FlatGCN (Flattened Graph Convolutional Networks for Recommendation, submitted to ICASSP2022). Req
This application aims to read all wifi passwords and visualizes the complexity in graph formation by taking into account several criteria and help you generate new random passwords.
This application aims to read all wifi passwords and visualizes the complexity in graph formation by taking into account several criteria and help you generate new random passwords.
GAT - Graph Attention Network (PyTorch) 💻 + graphs + 📣 = ❤️
GAT - Graph Attention Network (PyTorch) 💻 + graphs + 📣 = ❤️ This repo contains a PyTorch implementation of the original GAT paper ( 🔗 Veličković et
Jupyter Notebook tutorials on solving real-world problems with Machine Learning & Deep Learning using PyTorch
Jupyter Notebook tutorials on solving real-world problems with Machine Learning & Deep Learning using PyTorch. Topics: Face detection with Detectron 2, Time Series anomaly detection with LSTM Autoencoders, Object Detection with YOLO v5, Build your first Neural Network, Time Series forecasting for Coronavirus daily cases, Sentiment Analysis with BERT.
Code for paper [ACE: Ally Complementary Experts for Solving Long-Tailed Recognition in One-Shot] (ICCV 2021, oral))
ACE: Ally Complementary Experts for Solving Long-Tailed Recognition in One-Shot This repository is the official PyTorch implementation of ICCV-21 pape
Code for "Learning Skeletal Graph Neural Networks for Hard 3D Pose Estimation" ICCV'21
Skeletal-GNN Code for "Learning Skeletal Graph Neural Networks for Hard 3D Pose Estimation" ICCV'21 Various deep learning techniques have been propose
A new codebase for Group Activity Recognition. It contains codes for ICCV 2021 paper: Spatio-Temporal Dynamic Inference Network for Group Activity Recognition and some other methods.
Spatio-Temporal Dynamic Inference Network for Group Activity Recognition The source codes for ICCV2021 Paper: Spatio-Temporal Dynamic Inference Networ
Train Scene Graph Generation for Visual Genome and GQA in PyTorch = 1.2 with improved zero and few-shot generalization.
Scene Graph Generation Object Detections Ground truth Scene Graph Generated Scene Graph In this visualization, woman sitting on rock is a zero-shot tr
A library for graph deep learning research
Documentation | Paper [JMLR] | Tutorials | Benchmarks | Examples DIG: Dive into Graphs is a turnkey library for graph deep learning research. Why DIG?
A Telegram crawler to search groups and channels automatically and collect any type of data from them.
Introduction This is a crawler I wrote in Python using the APIs of Telethon months ago. This tool was not intended to be publicly available for a numb
Find graph motifs using intuitive notation
d o t m o t i f Find graph motifs using intuitive notation DotMotif is a library that identifies subgraphs or motifs in a large graph. It looks like t
Code for paper "Multi-level Disentanglement Graph Neural Network"
Multi-level Disentanglement Graph Neural Network (MD-GNN) This is a PyTorch implementation of the MD-GNN, and the code includes the following modules:
Go from graph data to a secure and interactive visual graph app in 15 minutes. Batteries-included self-hosting of graph data apps with Streamlit, Graphistry, RAPIDS, and more!
✔️ Linux ✔️ OS X ❌ Windows (#39) Welcome to graph-app-kit Turn your graph data into a secure and interactive visual graph app in 15 minutes! Why This
Animation of solving the traveling salesman problem to optimality using mixed-integer programming and iteratively eliminating sub tours
tsp-streamlit Animation of solving the traveling salesman problem to optimality using mixed-integer programming and iteratively eliminating sub tours.
Calibrated Hyperspectral Image Reconstruction via Graph-based Self-Tuning Network.
mask-uncertainty-in-HSI This repository contains the testing code and pre-trained models for the paper Calibrated Hyperspectral Image Reconstruction v
Fast Learning of MNL Model From General Partial Rankings with Application to Network Formation Modeling
Fast-Partial-Ranking-MNL This repo provides a PyTorch implementation for the CopulaGNN models as described in the following paper: Fast Learning of MN
This repository provides some of the code implemented and the data used for the work proposed in "A Cluster-Based Trip Prediction Graph Neural Network Model for Bike Sharing Systems".
cluster-link-prediction This repository provides some of the code implemented and the data used for the work proposed in "A Cluster-Based Trip Predict
Glyph-graph - A simple, yet versatile, package for graphing equations on a 2-dimensional text canvas
Glyth Graph Revision for 0.01 A simple, yet versatile, package for graphing equations on a 2-dimensional text canvas List of contents: Brief Introduct
Awesome Graph Classification - A collection of important graph embedding, classification and representation learning papers with implementations.
A collection of graph classification methods, covering embedding, deep learning, graph kernel and factorization papers
Captcha-tensorflow - Image Captcha Solving Using TensorFlow and CNN Model. Accuracy 90%+
Captcha Solving Using TensorFlow Introduction Solve captcha using TensorFlow. Learn CNN and TensorFlow by a practical project. Follow the steps, run t
Graph-total-spanning-trees - A Python script to get total number of Spanning Trees in a Graph
Total number of Spanning Trees in a Graph This is a python script just written f
Hyperopt for solving CIFAR-100 with a convolutional neural network (CNN) built with Keras and TensorFlow, GPU backend
Hyperopt for solving CIFAR-100 with a convolutional neural network (CNN) built with Keras and TensorFlow, GPU backend This project acts as both a tuto
Strongly local p-norm-cut algorithms for semi-supervised learning and local graph clustering
Strongly local p-norm-cut algorithms for semi-supervised learning and local graph clustering
AISTATS 2019: Confidence-based Graph Convolutional Networks for Semi-Supervised Learning
Confidence-based Graph Convolutional Networks for Semi-Supervised Learning Source code for AISTATS 2019 paper: Confidence-based Graph Convolutional Ne
Training neural models with structured signals.
Neural Structured Learning in TensorFlow Neural Structured Learning (NSL) is a new learning paradigm to train neural networks by leveraging structured
Keras implementation of the GNM model in paper ’Graph-Based Semi-Supervised Learning with Nonignorable Nonresponses‘
Graph-based joint model with Nonignorable Missingness (GNM) This is a Keras implementation of the GNM model in paper ’Graph-Based Semi-Supervised Lear
A Flexible Generative Framework for Graph-based Semi-supervised Learning (NeurIPS 2019)
G3NN This repo provides a pytorch implementation for the 4 instantiations of the flexible generative framework as described in the following paper: A
PyTorch implementation for Graph Contrastive Learning with Augmentations
Graph Contrastive Learning with Augmentations PyTorch implementation for Graph Contrastive Learning with Augmentations [poster] [appendix] Yuning You*
CCCL: Contrastive Cascade Graph Learning.
CCGL: Contrastive Cascade Graph Learning This repo provides a reference implementation of Contrastive Cascade Graph Learning (CCGL) framework as descr
GitHub Activity Generator - A script that helps you instantly generate a beautiful GitHub Contributions Graph for the last year.
GitHub Activity Generator A script that helps you instantly generate a beautiful GitHub Contributions Graph for the last year. Before 😐 😶 😒 After ?
GCC: Graph Contrastive Coding for Graph Neural Network Pre-Training @ KDD 2020
GCC: Graph Contrastive Coding for Graph Neural Network Pre-Training Original implementation for paper GCC: Graph Contrastive Coding for Graph Neural N
PyTorch implementation of deep GRAph Contrastive rEpresentation learning (GRACE).
GRACE The official PyTorch implementation of deep GRAph Contrastive rEpresentation learning (GRACE). For a thorough resource collection of self-superv
Graph Representation Learning via Graphical Mutual Information Maximization
GMI (Graphical Mutual Information) Graph Representation Learning via Graphical Mutual Information Maximization (Peng Z, Huang W, Luo M, et al., WWW 20
A PyTorch implementation of "SelfGNN: Self-supervised Graph Neural Networks without explicit negative sampling"
SelfGNN A PyTorch implementation of "SelfGNN: Self-supervised Graph Neural Networks without explicit negative sampling" paper, which will appear in Th
Pretraining on Dynamic Graph Neural Networks
Pretraining on Dynamic Graph Neural Networks Our article is PT-DGNN and the code is modified based on GPT-GNN Requirements python 3.6 Ubuntu 18.04.5 L
An implementation of Deep Graph Infomax (DGI) in PyTorch
DGI Deep Graph Infomax (Veličković et al., ICLR 2019): https://arxiv.org/abs/1809.10341 Overview Here we provide an implementation of Deep Graph Infom
Unsupervised Attributed Multiplex Network Embedding (AAAI 2020)
Unsupervised Attributed Multiplex Network Embedding (DMGI) Overview Nodes in a multiplex network are connected by multiple types of relations. However
Heterogeneous Deep Graph Infomax
Heterogeneous-Deep-Graph-Infomax Parameter Setting: HDGI-A: Node-level dimension: 16 Attention head: 4 Semantic-level attention vector: 8 learning rat
Code for ICDM2020 full paper: "Sub-graph Contrast for Scalable Self-Supervised Graph Representation Learning"
Subg-Con Sub-graph Contrast for Scalable Self-Supervised Graph Representation Learning (Jiao et al., ICDM 2020): https://arxiv.org/abs/2009.10273 Over
Graph InfoClust: Leveraging cluster-level node information for unsupervised graph representation learning
Graph-InfoClust-GIC [PAKDD 2021] PAKDD'21 version Graph InfoClust: Maximizing Coarse-Grain Mutual Information in Graphs Preprint version Graph InfoClu
A Python server and client app that tracks player session times and server status
MC Outpost A Python server and client application that tracks player session times and server status About MC Outpost provides a session graph and ser
Scientific measurement library for instruments, experiments, and live-plotting
PyMeasure scientific package PyMeasure makes scientific measurements easy to set up and run. The package contains a repository of instrument classes a
The code of paper "Block Modeling-Guided Graph Convolutional Neural Networks".
Block Modeling-Guided Graph Convolutional Neural Networks This repository contains the demo code of the paper: Block Modeling-Guided Graph Convolution
Official code for "InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximization" (ICLR 2020, spotlight)
InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximization Authors: Fan-yun Sun, Jordan Hoffm
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
NeoDTI NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions (Bioinformatics).
Implementation of paper "Self-supervised Learning on Graphs:Deep Insights and New Directions"
SelfTask-GNN A PyTorch implementation of "Self-supervised Learning on Graphs: Deep Insights and New Directions". [paper] In this paper, we first deepe
Source code of the "Graph-Bert: Only Attention is Needed for Learning Graph Representations" paper
Graph-Bert Source code of "Graph-Bert: Only Attention is Needed for Learning Graph Representations". Please check the script.py as the entry point. We
Pre-Training Graph Neural Networks for Cold-Start Users and Items Representation.
Pretrain-Recsys This is our Tensorflow implementation for our WSDM 2021 paper: Bowen Hao, Jing Zhang, Hongzhi Yin, Cuiping Li, Hong Chen. Pre-Training
PyTorch code of "SLAPS: Self-Supervision Improves Structure Learning for Graph Neural Networks"
SLAPS-GNN This repo contains the implementation of the model proposed in SLAPS: Self-Supervision Improves Structure Learning for Graph Neural Networks
Pre-training of Graph Augmented Transformers for Medication Recommendation
G-Bert Pre-training of Graph Augmented Transformers for Medication Recommendation Intro G-Bert combined the power of Graph Neural Networks and BERT (B
Code for KDD'20 "Generative Pre-Training of Graph Neural Networks"
GPT-GNN: Generative Pre-Training of Graph Neural Networks GPT-GNN is a pre-training framework to initialize GNNs by generative pre-training. It can be
Official PyTorch Implementation of "Self-supervised Auxiliary Learning with Meta-paths for Heterogeneous Graphs". NeurIPS 2020.
Self-supervised Auxiliary Learning with Meta-paths for Heterogeneous Graphs This repository is the implementation of SELAR. Dasol Hwang* , Jinyoung Pa
Deeper insights into graph convolutional networks for semi-supervised learning
deeper_insights_into_GCNs Deeper insights into graph convolutional networks for semi-supervised learning References data and utils.py come from Implem
Reference Code for AAAI-20 paper "Multi-Stage Self-Supervised Learning for Graph Convolutional Networks on Graphs with Few Labels"
Reference Code for AAAI-20 paper "Multi-Stage Self-Supervised Learning for Graph Convolutional Networks on Graphs with Few Labels" Please refer to htt
code for "Self-supervised edge features for improved Graph Neural Network training", arxivlink
Self-supervised edge features for improved Graph Neural Network training Data availability: Here is a link to the raw data for the organoids dataset.
[ICML 2020] DrRepair: Learning to Repair Programs from Error Messages
DrRepair: Learning to Repair Programs from Error Messages This repo provides the source code & data of our paper: Graph-based, Self-Supervised Program
Code for hyperboloid embeddings for knowledge graph entities
Implementation for the papers: Self-Supervised Hyperboloid Representations from Logical Queries over Knowledge Graphs, Nurendra Choudhary, Nikhil Rao,
The code for SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network.
SAG-DTA The code is the implementation for the paper 'SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network'. Requirements py
Adversarial Graph Representation Adaptation for Cross-Domain Facial Expression Recognition (AGRA, ACM 2020, Oral)
Cross Domain Facial Expression Recognition Benchmark Implementation of papers: Cross-Domain Facial Expression Recognition: A Unified Evaluation Benchm
The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding"
AutoSF The code for our paper "AutoSF: Searching Scoring Functions for Knowledge Graph Embedding" and this paper has been accepted by ICDE2020. News:
Build a medical knowledge graph based on Unified Language Medical System (UMLS)
UMLS-Graph Build a medical knowledge graph based on Unified Language Medical System (UMLS) Requisite Install MySQL Server 5.6 and import UMLS data int
MS Graph API authentication example with Fast API
MS Graph API authentication example with Fast API What it is & does This is a simple python service/webapp, using FastAPI with server side rendering,
LynxKite: a complete graph data science platform for very large graphs and other datasets.
LynxKite is a complete graph data science platform for very large graphs and other datasets. It seamlessly combines the benefits of a friendly graphical interface and a powerful Python API.
Spaghetti: an open-source Python library for the analysis of network-based spatial data
pysal/spaghetti SPAtial GrapHs: nETworks, Topology, & Inference Spaghetti is an open-source Python library for the analysis of network-based spatial d
A visualization tool to show a TensorFlow's graph like TensorBoard
tfgraphviz tfgraphviz is a module to visualize a TensorFlow's data flow graph like TensorBoard using Graphviz. tfgraphviz enables to provide a visuali
An End-to-End Machine Learning Library to Optimize AUC (AUROC, AUPRC).
Logo by Zhuoning Yuan LibAUC: A Machine Learning Library for AUC Optimization Website | Updates | Installation | Tutorial | Research | Github LibAUC a
Build an Amazon SageMaker Pipeline to Transform Raw Texts to A Knowledge Graph
Build an Amazon SageMaker Pipeline to Transform Raw Texts to A Knowledge Graph This repository provides a pipeline to create a knowledge graph from ra
🐍PyNode Next allows you to easily create beautiful graph visualisations and animations
PyNode Next A complete rewrite of PyNode for the modern era. Up to five times faster than the original PyNode. PyNode Next allows you to easily create
Example Code Notebooks for Data Visualization in Python
This repository contains sample code scripts for creating awesome data visualizations from scratch using different python libraries (such as matplotli
Quick insights from Zoom meeting transcripts using Graph + NLP
Transcript Analysis - Graph + NLP This program extracts insights from Zoom Meeting Transcripts (.vtt) using TigerGraph and NLTK. In order to run this
Random Directed Acyclic Graph Generator
DAG_Generator Random Directed Acyclic Graph Generator verison1.0 简介 工作流通常由DAG(有向无环图)来定义,其中每个计算任务$T_i$由一个顶点(node,task,vertex)表示。同时,任务之间的每个数据或控制依赖性由一条加权
Code for "Multimodal Trajectory Prediction Conditioned on Lane-Graph Traversals," CoRL 2021.
Multimodal Trajectory Prediction Conditioned on Lane-Graph Traversals This repository contains code for "Multimodal trajectory prediction conditioned
Source Code for AAAI 2022 paper "Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching"
Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching This repository is an official implementation of
NeoInterface - Neo4j made easy for Python programmers!
Neointerface - Neo4j made easy for Python programmers! A Python interface to use the Neo4j graph database, and simplify its use. class NeoInterface: C
Official code for the publication "HyFactor: Hydrogen-count labelled graph-based defactorization Autoencoder".
HyFactor Graph-based architectures are becoming increasingly popular as a tool for structure generation. Here, we introduce a novel open-source archit
Fastest Gephi's ForceAtlas2 graph layout algorithm implemented for Python and NetworkX
ForceAtlas2 for Python A port of Gephi's Force Atlas 2 layout algorithm to Python 2 and Python 3 (with a wrapper for NetworkX and igraph). This is the
A Python wrapper API for operating and working with the Neo4j Graph Data Science (GDS) library
gdsclient NOTE: This is a work in progress and many GDS features are known to be missing or not working properly. This repo hosts the sources for gdsc
A Python wrapper API for operating and working with the Neo4j Graph Data Science (GDS) library
gdsclient This repo hosts the sources for gdsclient, a Python wrapper API for operating and working with the Neo4j Graph Data Science (GDS) library. g
PyTorch implementation for our AAAI 2022 Paper "Graph-wise Common Latent Factor Extraction for Unsupervised Graph Representation Learning"
deepGCFX PyTorch implementation for our AAAI 2022 Paper "Graph-wise Common Latent Factor Extraction for Unsupervised Graph Representation Learning" Pr
Source Code for AAAI 2022 paper "Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching"
Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching This repository is an official implementation of
Software Platform for solving and manipulating multiparametric programs in Python
PPOPT Python Parametric OPtimization Toolbox (PPOPT) is a software platform for solving and manipulating multiparametric programs in Python. This pack
Code for 2021 NeurIPS --- Towards Multi-Grained Explainability for Graph Neural Networks
ReFine: Multi-Grained Explainability for GNNs This is the official code for Towards Multi-Grained Explainability for Graph Neural Networks (NeurIPS 20
Graph Self-Supervised Learning for Optoelectronic Properties of Organic Semiconductors
SSL_OSC Graph Self-Supervised Learning for Optoelectronic Properties of Organic Semiconductors
A PyTorch based deep learning library for drug pair scoring.
Documentation | External Resources | Datasets | Examples ChemicalX is a deep learning library for drug-drug interaction, polypharmacy side effect and
HTTP graph database built in Python 3
KiwiDB HTTP graph database built in Python 3. Reference Format References are strings in the format: {refIDENTIFIER@GROUP} Authentication Currently, t
[ICCV 2021] Target Adaptive Context Aggregation for Video Scene Graph Generation
Target Adaptive Context Aggregation for Video Scene Graph Generation This is a PyTorch implementation for Target Adaptive Context Aggregation for Vide
Code for the ICCV'21 paper "Context-aware Scene Graph Generation with Seq2Seq Transformers"
ICCV'21 Context-aware Scene Graph Generation with Seq2Seq Transformers Authors: Yichao Lu*, Himanshu Rai*, Cheng Chang*, Boris Knyazev†, Guangwei Yu,
Library extending Jupyter notebooks to integrate with Apache TinkerPop and RDF SPARQL.
Graph Notebook: easily query and visualize graphs The graph notebook provides an easy way to interact with graph databases using Jupyter notebooks. Us
A Persistent Embedded Graph Database for Python
Cog - Embedded Graph Database for Python cogdb.io New release: 2.0.5! Installing Cog pip install cogdb Cog is a persistent embedded graph database im
Offline Multi-Agent Reinforcement Learning Implementations: Solving Overcooked Game with Data-Driven Method
Overcooked-AI We suppose to apply traditional offline reinforcement learning technique to multi-agent algorithm. In this repository, we implemented be
Edge-Augmented Graph Transformer
Edge-augmented Graph Transformer Introduction This is the official implementation of the Edge-augmented Graph Transformer (EGT) as described in https: