Python Graph-Bert Resources

LTP: Learned Token Pruning for Transformers Check our paper for more details. Installation We follow the same installation procedure as the original H

TilinGNN: Learning to Tile with Self-Supervised Graph Neural Network (SIGGRAPH 2020) About The goal of our research problem is illustrated below: give

Open-source tool for exploring, labeling, and monitoring data for AI projects

English | 简体中文 | 繁體中文 State-of-the-art Natural Language Processing for Jax, PyTorch and TensorFlow 🤗 Transformers provides thousands of pretrained mo

Graph Wavelet Neural Network ⠀⠀ A PyTorch implementation of Graph Wavelet Neural Network (ICLR 2019). Abstract We present graph wavelet neural network

Attention Walk ⠀⠀ A PyTorch Implementation of Watch Your Step: Learning Node Embeddings via Graph Attention (NIPS 2018). Abstract Graph embedding meth

SGCN ⠀ A PyTorch implementation of Signed Graph Convolutional Network (ICDM 2018). Abstract Due to the fact much of today's data can be represented as

Scalable Incomplete Network Embedding ⠀⠀ A PyTorch implementation of Scalable Incomplete Network Embedding (ICDM 2018). Abstract Attributed network em

GAM ⠀⠀ A PyTorch implementation of Graph Classification Using Structural Attention (KDD 2018). Abstract Graph classification is a problem with practic

TuckER: Tensor Factorization for Knowledge Graph Completion This codebase contains PyTorch implementation of the paper: TuckER: Tensor Factorization f

SimGNN ⠀⠀⠀ A PyTorch implementation of SimGNN: A Neural Network Approach to Fast Graph Similarity Computation (WSDM 2019). Abstract Graph similarity s

APPNP ⠀ A PyTorch implementation of Predict then Propagate: Graph Neural Networks meet Personalized PageRank (ICLR 2019). Abstract Neural message pass

MixHop and N-GCN ⠀ A PyTorch implementation of "MixHop: Higher-Order Graph Convolutional Architectures via Sparsified Neighborhood Mixing" (ICML 2019)

Splitter ⠀⠀ A PyTorch implementation of Splitter: Learning Node Representations that Capture Multiple Social Contexts (WWW 2019). Abstract Recent inte

CapsGNN ⠀⠀ A PyTorch implementation of Capsule Graph Neural Network (ICLR 2019). Abstract The high-quality node embeddings learned from the Graph Neur

SEAL ⠀⠀⠀ A PyTorch implementation of Semi-Supervised Graph Classification: A Hierarchical Graph Perspective (WWW 2019) Abstract Node classification an

ClusterGCN ⠀⠀ A PyTorch implementation of "Cluster-GCN: An Efficient Algorithm for Training Deep and Large Graph Convolutional Networks" (KDD 2019). A

On the Bottleneck of Graph Neural Networks and its Practical Implications This is the official implementation of the paper: On the Bottleneck of Graph

Library | Paper | Slack We released two versions of OAG-BERT in CogDL package. OAG-BERT is a heterogeneous entity-augmented academic language model wh

Hierarchical Cross-Modal Agent for Robotics Vision-and-Language Navigation This repository is the pytorch implementation of our paper: Hierarchical Cr

ElasticGNN This repository includes the official implementation of ElasticGNN in the paper "Elastic Graph Neural Networks" [ICML 2021]. Xiaorui Liu, W

MidiBERT-Piano Authors: Yi-Hui (Sophia) Chou, I-Chun (Bronwin) Chen Introduction This is the official repository for the paper, MidiBERT-Piano: Large-

PGExplainer This is a Tensorflow implementation of the paper: Parameterized Explainer for Graph Neural Network https://arxiv.org/abs/2011.04573 NeurIP

A collection of research papers and software related to explainability in graph machine learning.

PyKEEN PyKEEN (Python KnowlEdge EmbeddiNgs) is a Python package designed to train and evaluate knowledge graph embedding models (incorporating multi-m

Binance Report Bot The intent of this bot is to take a snapshot of your binance wallet, e.g. the current balances and store it for further plotting. I

CLIPPER: A Graph-Theoretic Framework for Robust Data Association Data association is a fundamental problem in robotics and autonomy. CLIPPER provides

Self-supervised Graph-level Representation Learning with Local and Global Structure Introduction This project is an implementation of ``Self-supervise

VD-BERT: A Unified Vision and Dialog Transformer with BERT PyTorch Code for the following paper at EMNLP2020: Title: VD-BERT: A Unified Vision and Dia

Heterogeneous INteract and aggreGatE (GraphHINGE) This is a pytorch implementation of GraphHINGE model. This is the experiment code in the following w

Box is a text-based visual programming language inspired by Unreal Engine blueprint function graphs. $ cat factorial.box ┌─ƒ(Factorial)───┐

GCResNet PyTorch implementation of Graph Convolutional Networks in Feature Space for Image Deblurring and Super-resolution, IJCNN 2021. The code will

This is my reading list for my PhD in AI, NLP, Deep Learning and more.

VD-BERT: A Unified Vision and Dialog Transformer with BERT PyTorch Code for the following paper at EMNLP2020: Title: VD-BERT: A Unified Vision and Dia

GPRGNN This is the source code for our ICLR2021 paper: Adaptive Universal Generalized PageRank Graph Neural Network. Hidden state feature extraction i

Physics-aware Difference Graph Networks for Sparsely-Observed Dynamics This repository is the official PyTorch implementation of "Physics-aware Differ

Learning Canonical Representations for Scene Graph to Image Generation (ECCV 2020) Roei Herzig*, Amir Bar*, Huijuan Xu, Gal Chechik, Trevor Darrell, A

Graph-to-Graph Transformers Self-attention models, such as Transformer, have been hugely successful in a wide range of natural language processing (NL

adapter-transformers A friendly fork of HuggingFace's Transformers, adding Adapters to PyTorch language models adapter-transformers is an extension of

Graph4NLP Graph4NLP is an easy-to-use library for R&D at the intersection of Deep Learning on Graphs and Natural Language Processing (i.e., DLG4NLP).

Graph Transformer - Pytorch Implementation of Graph Transformer in Pytorch, for potential use in replicating Alphafold2. This was recently used by bot

BoB: BERT Over BERT for Training Persona-based Dialogue Models from Limited Personalized Data This repository provides the implementation details for

PyTorch impelementations of BERT-based Spelling Error Correction Models

PyTorch impelementations of BERT-based Spelling Error Correction Models. 基于BERT的文本纠错模型，使用PyTorch实现。

Wisdomify A BERT-based reverse-dictionary of Korean proverbs. 김유빈 : 모델링 / 데이터 수집 / 프로젝트 설계 / back-end 김종윤 : 데이터 수집 / 프로젝트 설계 / front-end Quick Start C

DeepCDR Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network This work has been accepted to ECCB2020 and was also published in the

FinGAT: A Financial Graph Attention Networkto Recommend Top-K Profitable Stocks This is our implementation for the paper: FinGAT: A Financial Graph At

LV-BERT Introduction In this repo, we introduce LV-BERT by exploiting layer variety for BERT. For detailed description and experimental results, pleas

Random Walk Graph Neural Networks This repository is the official implementation of Random Walk Graph Neural Networks. Requirements Code is written in

JittorVis - Visual understanding of deep learning model.

LV-BERT Introduction In this repo, we introduce LV-BERT by exploiting layer variety for BERT. For detailed description and experimental results, pleas

AWS_ORG_MAPPER This tool uses sso-oidc to authenticate to the AWS organization. Once authenticated the tool will attempt to enumerate all users and ro

TunBERT is the first release of a pre-trained BERT model for the Tunisian dialect using a Tunisian Common-Crawl-based dataset. TunBERT was applied to three NLP downstream tasks: Sentiment Analysis (SA), Tunisian Dialect Identification (TDI) and Reading Comprehension Question-Answering (RCQA)

We present Graph Neural Diffusion (GRAND) that approaches deep learning on graphs as a continuous diffusion process and treats Graph Neural Networks (GNNs) as discretisations of an underlying PDE.

The final code for OGB Installation Requirements: ogb=1.3.1 torch=1.7.0 torch-geometric=1.7.0 torch-scatter=2.0.6 torch-sparse=0.6.9 Baseline models T

LMs for biomedical KG completion This repository contains code to run the experiments described in: Scientific Language Models for Biomedical Knowledg

Graph Contrastive Learning Automated PyTorch implementation for Graph Contrastive Learning Automated [talk] [poster] [appendix] Yuning You, Tianlong C

This is the repo for the paper: Leveraging Two Types of Global Graph for Sequential Fashion Recommendation Requirements OS: Ubuntu 16.04 or higher ver

BERT-for-Surprisal Python Implementation of ``Modeling the Influence of Verb Aspect on the Activation of Typical Event Locations with BERT'' (Findings

Graphormer By Chengxuan Ying, Tianle Cai, Shengjie Luo, Shuxin Zheng*, Guolin Ke, Di He*, Yanming Shen and Tie-Yan Liu. This repo is the official impl

Open-Domain Question Answering(ODQA)는 다양한 주제에 대한 문서 집합으로부터 자연어 질의에 대한 답변을 찾아오는 task입니다. 이때 사용자 질의에 답변하기 위해 주어지는 지문이 따로 존재하지 않습니다. 따라서 사전에 구축되어있는 Knowl

PyGAS: Auto-Scaling GNNs in PyG PyGAS is the practical realization of our G NN A uto S cale (GAS) framework, which scales arbitrary message-passing GN

Graph-to-Tree Learning for Solving Math Word Problems PyTorch implementation of Graph based Math Word Problem solver described in our ACL 2020 paper G

[TensorFlow] Protein Interface Prediction using Graph Convolutional Networks Unofficial TensorFlow implementation of Protein Interface Prediction usin

You Only Compress Once: Towards Effective and Elastic BERT Compression via Exploit-Explore Stochastic Nature Gradient (paper) @misc{zhang2021compress,

GSDN-F and GSDN-EF This repository provides a reference implementation of GSDN-F and GSDN-EF as described in the paper "Understanding Graph Neural Net

Degree-Quant This repo provides a clean re-implementation of the code associated with the paper Degree-Quant: Quantization-Aware Training for Graph Ne

TR-BERT Source code and dataset for "TR-BERT: Dynamic Token Reduction for Accelerating BERT Inference". The code is based on huggaface's transformers.

ProcrustEs-KGE Paddle implementation for Highly Efficient Knowledge Graph Embedding Learning with Orthogonal Procrustes Analysis 🙈 A more detailed re

How Attentive are Graph Attention Networks? This repository is the official implementation of How Attentive are Graph Attention Networks?. The PyTorch

Chinese clinical named entity recognition (CNER) using pre-trained BERT model Introduction Code for paper Chinese clinical named entity recognition wi

SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization This is the code for our paper ``SumGNN: Multi-typed Drug

GCN-LPA This repository is the implementation of GCN-LPA (arXiv): Unifying Graph Convolutional Neural Networks and Label Propagation Hongwei Wang, Jur

Simple Spectral Graph Convolutional Overview This repo contains an example implementation of the Simple Spectral Graph Convolutional (S^2GC) model. Th

Lexicon Enhanced Chinese Sequence Labeling Using BERT Adapter Code and checkpoints for the ACL2021 paper "Lexicon Enhanced Chinese Sequence Labelling

Grapy-ML: Graph Pyramid Mutual Learning for Cross-dataset Human Parsing This repository contains pytorch source code for AAAI2020 oral paper: Grapy-ML

Factor graphs + nonlinear optimization in JAX

OEIS explorer This is a tool for exploring two different kinds of relationships between sequences in the OEIS: mentions (links) of other sequences on

Kaleido-BERT: Vision-Language Pre-training on Fashion Domain Mingchen Zhuge*, Dehong Gao*, Deng-Ping Fan#, Linbo Jin, Ben Chen, Haoming Zhou, Minghui

DeepFRI Deep functional residue identification Citing @article {Gligorijevic2019, author = {Gligorijevic, Vladimir and Renfrew, P. Douglas and Koscio

If the compilation is successful, the evaluator of cpp implementation will be called automatically. Otherwise, the evaluator of python implementation will be called.

DDAMS This is the pytorch code for our IJCAI 2021 paper Dialogue Discourse-Aware Graph Model and Data Augmentation for Meeting Summarization [Arxiv Pr

Hierarchical Cross-Modal Agent for Robotics Vision-and-Language Navigation This repository is the pytorch implementation of our paper: Hierarchical Cr

An Unsupervised Graph-based Toolbox for Fraud Detection Introduction: UGFraud is an unsupervised graph-based fraud detection toolbox that integrates s

When2com: Multi-Agent Perception via Communication Graph Grouping This is the PyTorch implementation of our paper: When2com: Multi-Agent Perception vi

Expressive Power of Invariant and Equivaraint Graph Neural Networks In this repository, we show how to use powerful GNN (2-FGNN) to solve a graph alig

GCA Source code for Graph Contrastive Learning with Adaptive Augmentation (WWW 2021) For example, to run GCA-Degree under WikiCS, execute: python trai

Fork from https://github.com/huggingface/transformers/tree/86d5fb0b360e68de46d40265e7c707fe68c8015b/examples/pytorch/language-modeling at 2021.05.17.

SapBERT: Self-alignment pretraining for BERT This repo holds code for the SapBERT model presented in our NAACL 2021 paper: Self-Alignment Pretraining

python_graphs This package is for computing graph representations of Python programs for machine learning applications. It includes the following modu

MILES Multilingual Lexical Simplifier Explore the docs » Read LSBert Paper · Report Bug · Request Feature About The Project MILES is a multilingual te

PairRE Code for paper PairRE: Knowledge Graph Embeddings via Paired Relation Vectors. This implementation of PairRE for Open Graph Benchmak datasets (

Texar-PyTorch is a toolkit aiming to support a broad set of machine learning, especially natural language processing and text generation tasks. Texar

BERT NER Use google BERT to do CoNLL-2003 NER ! Train model using Python and Inference using C++ ALBERT-TF2.0 BERT-NER-TENSORFLOW-2.0 BERT-SQuAD Requi

BERT-pytorch Pytorch implementation of Google AI's 2018 BERT, with simple annotation BERT 2018 BERT: Pre-training of Deep Bidirectional Transformers f

jiant is an NLP toolkit The multitask and transfer learning toolkit for natural language processing research Why should I use jiant? jiant supports mu

Karate Club is an unsupervised machine learning extension library for NetworkX. Please look at the Documentation, relevant Paper, Promo Video, and Ext

SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks Molecular interaction networks are powerful resources for the discovery. While dee

Graph-Based Protein Design This repo contains code for Generative Models for Graph-Based Protein Design by John Ingraham, Vikas Garg, Regina Barzilay

SentiLARE: Sentiment-Aware Language Representation Learning with Linguistic Knowledge Introduction SentiLARE is a sentiment-aware pre-trained language