Python Biological-data-analysis Resources

Cookiecutter Data Science A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. Project homepage

eyes is a Public Opinion Mining System focusing on taiwanese forums such as PTT, Dcard. Features 🔥 Article monitor: helps you capture the trend at a

Economics Observatory Visualisation Repository Website | Visualisations | Data | Here you will find all the data visualisations and infographics attac

Invite PrettyJSON to your Discord server Table of contents About the project What is JSON? What is pretty printing? How to use Input options Command I

Perturber Code for our paper "Interactive Analysis of CNN Robustness" Datasets Feature visualizations: Google Drive Fine-tuning checkpoints as saved m

Mixup-Data-Dependency Code associated with the paper "Towards Understanding the Data Dependency of Mixup-style Training". Running Alternating Line Exp

Codebase for learning control flow in transformers The official repository for our paper "The Neural Data Router: Adaptive Control Flow in Transformer

UWMMSE-stability Tensorflow implementation of Stability Analysis of UWMMSE Overview This library contains a Tensorflow implementation of the paper Sta

UIT-ViSD4SA PACLIC 35 General Introduction This repository contains the data of the paper: Span Detection for Vietnamese Aspect-Based Sentiment Analys

catbridge_tools Tools for working with MARC data in Catalogue Bridge. Borrows heavily from PyMarc

Collect Training and Calibration Data for Gaze Tracking This tool allows collecting gaze data necessary for personal calibration or training of eye-tr

Distant Supervision for Scene Graph Generation Data and code for ICCV 2021 paper Distant Supervision for Scene Graph Generation. Introduction The pape

Documentation and issues for Pylance - Fast, feature-rich language support for Python

Unofficial Open Corporates CLI OpenCorporates is a website that shares data on corporations under the copyleft Open Database License. This is an unoff

Powerpal custom component for Home Assistant Component to integrate with powerpal. This repository and integration is not affiliated with Powerpal. Th

Cryptocurrency Exchange Websocket Data Feed Handler

Datashredder is a simple data corruption engine written in python. You can corrupt anything text, images and video. You can chose the cha

Tindicators is a Python library to calculate the values of various technical indicators

AWS infrastructure to ship CloudTrail logs from S3 to Kinesis This repository contains a Terraform module to ship CloudTrail logs stored in a S3 bucke

TikTok Scraper An utility library to scrape data from TikTok hassle-free Go to the website » View Demo · Report Bug · Request Feature About The Projec

Research 发布基于飞桨的前沿研究工作，包括CV、NLP、KG、STDM等领域的顶会论文和比赛冠军模型。 目录 计算机视觉(Computer Vision) 自然语言处理(Natrual Language Processing) 知识图谱(Knowledge Graph) 时空数据挖掘(Spa

Time-Sensitive-QA The repo contains the dataset and code for NeurIPS2021 (dataset track) paper Time-Sensitive Question Answering dataset. The dataset

Continual Learning on Noisy Data Streams via Self-Purified Replay This repository contains the official PyTorch implementation for our ICCV2021 paper.

International Space Station data with Python research 🌎 Plotting ISS trajectory, calculating the velocity over the earth and more. Plotting trajector

Code and data for learning to search in local branching

Detecting Errors and Estimating Accuracy on Unlabeled Data with Self-training Ensembles This project is for the paper: Detecting Errors and Estimating

Deep Markov Factor Analysis (DMFA) Codes and experiments for deep Markov factor analysis (DMFA) model accepted for publication at NeurIPS2021: A. Farn

UC Module Python Package How To Install clone repo. cd UC-module pip install . How to Use uc.module.UC(measurment=str, dark=str, reference=str, heade

sentiment-analysis A simple demonstration of integrating a sentiment analysis tool in a django project (watch the video .mp4) To run this project : pi

Flink AI Flow Introduction Flink AI Flow is an open source framework that bridges big data and artificial intelligence. It manages the entire machine

TwitterScraper Script for scrape user data like "id,username,fullname,followers,tweets .. etc" by Twitter's search engine . Screenshot Data Users Only

d3-flame-graph A D3.js plugin that produces flame graphs from hierarchical data. If you don't know what flame graphs are, check Brendan Gregg's post.

Python based Wikidata framework for easy dataframe extraction wikirepo is a Python package that provides a framework to easily source and leverage sta

Current build status All platforms: Current release info Name Downloads Version Platforms Hapi - Hydrological library for Python Hapi is an open-sourc

ANTsPyNet A collection of deep learning architectures and applications ported to the python language and tools for basic medical image processing. Bas

PyPi Conda The Multi-Mission Maximum Likelihood framework (3ML) A framework for multi-wavelength/multi-messenger analysis for astronomy/astrophysics.

pySPEDAS pySPEDAS is an implementation of the SPEDAS framework for Python. The Space Physics Environment Data Analysis Software (SPEDAS) framework is

Mathematical modeling is a powerful method for the analysis of complex biological systems. Although there are many researches devoted on produ

Weathercrawler Automatic extraction and processing framework for weather data from wttr.in Installation tested with: Python 3.7.3 Python 3.9.4 git clo

Multi-Task Framework for Cross-Lingual Abstractive Summarization (MCLAS) The code for ACL2021 paper Cross-Lingual Abstractive Summarization with Limit

Parrot Parrot is a paraphrase based utterance augmentation framework purpose built to accelerate training NLU models. A paraphrase framework is more t

MaD GUI Machine Learning and Data Analytics Graphical User Interface MaD GUI is a basis for graphical annotation and computational analysis of time se

Multiview Orthographic Feature Transformation for 3D Object Detection Multiview 3D object detection on MultiviewC dataset through moft3d. Introduction

Efficient matrix representations for working with tabular data

A collection of papers about Transformer in the field of medical image analysis.

Neural Rationale Interpretability Analysis We analyze the neural rationale models proposed by Lei et al. (2016) and Bastings et al. (2019), as impleme

Research 发布基于飞桨的前沿研究工作，包括CV、NLP、KG、STDM等领域的顶会论文和比赛冠军模型。 目录 计算机视觉(Computer Vision) 自然语言处理(Natrual Language Processing) 知识图谱(Knowledge Graph) 时空数据挖掘(Spa

StyleAttack Code and data of the EMNLP 2021 paper "Mind the Style of Text! Adversarial and Backdoor Attacks Based on Text Style Transfer" Prepare Pois

Overview The Open Graph Benchmark (OGB) is a collection of benchmark datasets, data loaders, and evaluators for graph machine learning. Datasets cover

DeCLIP Supervision Exists Everywhere: A Data Efficient Contrastive Language-Image Pre-training Paradigm. Our paper is available in arxiv Updates ** Ou

Video Scene Cut Detection and Analysis Tool Latest Release: v0.5.6.1 (October 11, 2021) Main Webpage: py.scenedetect.com Documentation: manual.scenede

DataPrep — The easiest way to prepare data in Python

A data visualization curriculum of interactive notebooks, using Vega-Lite and Altair. This repository contains a series of Python-based Jupyter notebooks.

PyTransKit Python Transport Based Signal Processing Toolkit Website and documentation: https://pytranskit.readthedocs.io/ Installation The library cou

LDBE Pytorch implementation for two papers (the paper will be released soon): "Domain Adaptive Semantic Segmentation without Source Data", ACM MM2021.

CrossFake An English-Chinese COVID-19 fake&real news dataset from the ICDMW 2021 paper below: Cross-lingual COVID-19 Fake News Detection. Jiangshu Du,

OCR Ground Truth for Historical Commentaries The dataset OCR ground truth for historical commentaries (GT4HistComment) was created from the public dom

Fast Fourier Convolution (FFC) for Image Classification This is the official code of Fast Fourier Convolution for image classification on ImageNet. Ma

SpaceX Sofware I developed software to scrape data on SpaceX: Capsules, Rockets, Cores, Roadsters, SpaceX Info to use the software you need Python a

Implementation of ICCV 2021 paper: PnP-DETR: Towards Efficient Visual Analysis with Transformers arxiv This repository is based on detr Recently, DETR

Time Masking for Temporal Language Models This repository provides a reference implementation of the paper: Time Masking for Temporal Language Models

A Python package that scrapes Google News article data while remaining undetected by Google. Our scraper can scrape page data up until the last page and never trigger a CAPTCHA (download stats: https://pepy.tech/project/GoogleNewsScraper)

Web Scrapping Popular Youtube Tech Channels with Selenium Data Mining, Data Wrangling, and Exploratory Data Analysis About the Data Web scrapi

httpmapper 👁️ Project • Technologies • Installation • How it works • License Project 🚧 For educational purposes. This is a project that I developed,

The open-source web scrapers that feed the Los Angeles Times' California coronavirus tracker. Processed data ready for analysis is available at datade

nbscraper Overview This simple tool automates the process of copying, pasting, and organizing data from NewsBank API searches. Curerntly, nbscrape onl

New to Streaming Scraper An in-progress web scraping project built with Python, R, and SQL. The scraped data are movie and TV show information. The go

YouTube data scraper To easily scrape any data from the youtube homepage, a youtube channel/user, search results, playlists, and a single video itself

Universal Reddit Scraper - A comprehensive Reddit scraping command-line tool written in Python.

Swahili-Speech-To-Text Table of Contents Swahili-Speech-To-Text Overview Scenario Approach Project Structure data: models: notebooks: scripts tests: l

Backtesting the "Cramer Effect" & Recommendations from Cramer Recommendations from Cramer: On the show Mad-Money (CNBC) Jim Cramer picks stocks which

DaDRA (day-druh) is a Python library for Data-Driven Reachability Analysis. The main goal of the package is to accelerate the process of computing estimates of forward reachable sets for nonlinear dynamical systems.

Statistical Analysis 📈 This repository focuses on statistical analysis and the exploration used on various data sets for personal and professional pr

pyETT: Python library for Eleven VR Table Tennis data Documentation Documentation for pyETT is located at https://pyett.readthedocs.io/. Installation

Data Analyst with PYTHON Data Analyst berperan dalam menghasilkan analisa data serta mempresentasikan insight untuk membantu proses pengambilan keputu

A part of HyRiver software stack that provides access to NHD+ V2 data through NLDI and WaterData web services

The Python Package for DataHerb A DataHerb Core Service to Create and Load Datasets.

1 Python for Power System Analysis Contents 1 Python for Power System Analysis 1.1 About 1.2 Documentation 1.3 Functionality 1.4 Example scripts as Ju

The leading use-case for the staircase package is for the creation and analysis of step functions. Pretty exciting huh. But don't hit the close button

HyperSpy is an open source Python library for the interactive analysis of multidimensional datasets that can be described as multidimensional arrays o

PyLHC Tools This package is a collection of useful scripts and tools for the Optics Measurements and Corrections group (OMC) at CERN. Documentation Au

GWpy is a collaboration-driven Python package providing tools for studying data from ground-based gravitational-wave detectors. GWpy provides a user-f

Open Data Cube Core Overview The Open Data Cube Core provides an integrated gridded data analysis environment for decades of analysis ready earth obse

Toolchest Python Client Toolchest provides APIs for scientific and bioinformatic data analysis. It allows you to abstract away the costliness of runni

A data analysis using python and pandas to showcase trends in school performance. A data analysis to showcase trends in school performance using Panda

Bangalore-House-Price-Prediction An end-to-end regression problem of predicting the price of properties in Bangalore. Deployed in Heroku using Flask.

Long Course "Geophysical Python for Seismic Data Analysis" Instruktur: Dr.rer.nat. Wiwit Suryanto, M.Si Dipersiapkan oleh: Anang Sahroni Waktu: Sesi 1

The OHSDI OMOP Common Data Model allows for the systematic analysis of healthcare observational databases.

U_analysis Universal data analysis tools for atmospheric sciences Script written in python 3. This file defines multiple functions that can be used fo

nz-weather For a live build, visit - https://brandonru.pythonanywhere.com/ NZ Openweather API data rendered using Django3 and requests ☀️ Local Run In

Trained on Simulated Data, Tested in the Real World

Elicited Helper tools to construct probability distributions built from expert elicited data for use in monte carlo simulations. Credit to Brett Hoove

A synthetic dataset for object detection of UAVs This repository contains a synthetic datasets accompanying the paper Sim2Air - Synthetic aerial datas

Less is More: Learning from Synthetic Data with Fine-grained Attributes for Person Re-Identification Suncheng Xiang Shanghai Jiao Tong University Over

MultiwayClassification This is an R package to perform linear classification for data with multi-way structure. The distance-weighted discrimination (

TCube: Domain-Agnostic Neural Time series Narration This repository contains the code for the paper: "TCube: Domain-Agnostic Neural Time series Narrat

InterpretationData This repository is for our EMNLP 2021 paper: It is Not as Good as You Think! Evaluating Simultaneous Machine Translation on Interpr

OpenCV-Multiple-Object-Tracking Python is version 3.6.7 to install opencv: pip uninstall opecv-python pip uninstall opencv-contrib-python pip install

scBALF Covid-19 dataset Analysis Here is the Github page that has the codes for the bioinformatics pipeline described in the paper COVID-Datathon: Bio

Doubly Trained Neural Machine Translation System for Adversarial Attack and Data Augmentation Languages Experimented: Data Overview: Source Target Tra