Python Protein-function-prediction Resources

LSTM-Time-Series-Prediction A Simple LSTM-Based Solution for "Heartbeat Signal Classification and Prediction" in Tianchi Contest. The Link of the Cont

kaggle_riiid Transformer part of 12th place solution in Riiid! Answer Correctness Prediction. Please see here for more information. Execution You need

SMU A Tensorflow Implementation of SMU: SMOOTH ACTIVATION FUNCTION FOR DEEP NETWORKS USING SMOOTHING MAXIMUM TECHNIQUE arXiv https://arxiv.org/abs/211

Real-time stock predictions with deep learning and news scraping This repository contains a partial implementation of my bachelor's thesis "Real-time

House-Price-Prediction-Using-Linear-Regression The dataset I used for this personal project is from Kaggle uploaded by aariyan panchal. Link of Datase

PySpark-Bank-Churn Surname: corresponds to the record (row) number and has no effect on the output. CreditScore: contains random values and has no eff

Introduction EEGEyeNet EEGEyeNet is a benchmark to evaluate ET prediction based on EEG measurements with an increasing level of difficulty. Overview T

Head-and-Neck-Tumour-Segmentation-and-Prediction-of-Patient-Survival Welcome to the Head and Neck Tumour Segmentation and Prediction of Patient Surviv

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

AI-UPV at IberLEF-2021 EXIST task: Sexism Prediction in Spanish and English Tweets Using Monolingual and Multilingual BERT and Ensemble Models Descrip

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

Pipetools Complete documentation pipetools enables function composition similar to using Unix pipes. It allows forward-composition and piping of arbit

CS4044D Machine Learning Assignment 1 By Dev Sony, B180297CS The question, report and source code can be found here. Github Repo Solution 1 Based on t

This package is a python library with tools for the Molecular Simulation - Software Gromos. It allows you to easily set up, manage and analyze simulations in python.

Introduction orfipy is a tool written in python/cython to extract ORFs in an extremely and fast and flexible manner. Other popular ORF searching tools

Python Orbit Ephemeris Message tools Python tools for working with Orbit Ephemeris Messages (OEMs). Development Status Installation The oem package is

ICCV 2021: Where are you heading? Dynamic Trajectory Prediction with Expert Goal Examples This repository contains the code for the paper Where are yo

Safety-aware Motion Prediction with Unseen Vehicles for Autonomous Driving Safety-aware Motion Prediction with Unseen Vehicles for Autonomous Driving

MG-GAN: A Multi-Generator Model Preventing Out-of-Distribution Samples in Pedestrian Trajectory Prediction This repository contains the code for the p

Personalized Trajectory Prediction via Distribution Discrimination (DisDis) The official PyTorch code implementation of "Personalized Trajectory Predi

Human Trajectory Prediction via Counterfactual Analysis (CausalHTP) The official PyTorch code implementation of "Human Trajectory Prediction via Count

FaPN: Feature-aligned Pyramid Network for Dense Image Prediction [arXiv] [Project Page] @inproceedings{ huang2021fapn, title={{FaPN}: Feature-alig

Cryptocurrency price prediction and exceptions in python This is a coursework on foundations of computing module Through this coursework i worked on m

MARLITE Shiny app for floating marine litter detection in aerial images. This directory contains the instructions and software needed to install the S

Semisupervised Multitask Learning This repository is an unofficial and slightly modified implementation of UM-Adapt[1] using PyTorch. This code primar

Explore RNA-Protein interactions. RNPFind is a bioinformatics tool. It takes an RNA transcript as input and gives a list of RNA binding protein (RBP)

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

Stochastic Scene-Aware Motion Prediction [Project Page] [Paper] Description This repository contains the training code for MotionNet and GoalNet of SA

PECOS - Predictions for Enormous and Correlated Output Spaces PECOS is a versatile and modular machine learning (ML) framework for fast learning and i

Personal thermal comfort models using digital twins: Preference prediction with BIM-extracted spatial-temporal proximity data from Build2Vec This repo

DSP: Trajectory Prediction with Graph-based Dual-scale Context Fusion Introduction This is the project page of the paper Lu Zhang, Peiliang Li, Jing C

ChangeConsoleTextColour a simple function that randomly generates and applies console text colors This repository corresponds to my Python Functions f

Next Word Prediction Keywords : Streamlit, BertTokenizer, BertForMaskedLM, Pytorch 🎬 Project Demo ✔ Application is hosted on Streamlit. You can see t

DivisorsFunctionCalculator A program for calculating the divisor function A script to find the "Sigma" (divisors function) of any number. To find the

Predicitng_viability Using Streamlit to host a multi-page tool with model specs and classification metrics, while also accepting user input values for

fake-email A simple library project, a library function to make a temporary email, receive all messages Installation : pip install fake-email Example

Lossy Compression for Lossless Prediction Using: Training: This repostiory contains our implementation of the paper: Lossy Compression for Lossless Pr

MISA Abstract Generalization across environments is critical to the successful application of reinforcement learning algorithms to real-world challeng

What is liGAN? liGAN is a research codebase for training and evaluating deep generative models for de novo drug design based on 3D atomic density grid

Using Time-Series Privileged Information for Provably Efficient Learning of Prediction Models Link to paper Abstract We study prediction of future out

Python Function to manage users via SCIM This script helps you to manage your v2 users. You can add and delete users or groups, add users to groups an

With this package, you can generate mixed-integer linear programming (MIP) models of trained artificial neural networks (ANNs) using the rectified linear unit (ReLU) activation function. At the moment, only TensorFlow sequential models are supported. Interfaces to either the Pyomo or Gurobi modeling environments are offered.

airflow-dbt-python An Airflow operator to call the main function from the dbt-core Python package Motivation Airflow running in a managed environment

Predicting lncRNA–protein interactions based on graph autoencoders and collaborative training Code for our paper "Predicting lncRNA–protein interactio

Wlan Fetcher Windows10 Description A simple python-function, to gain all wlan passwords from stored wlan-profiles on a computer. Usage This Script onl

Abstract Every year, floods cause billions of dollars’ worth of damages to life, crops, and property. With a proper early flood warning system in plac

Decoupled-Contrastive-Learning This repository is an implementation for the loss function proposed in Decoupled Contrastive Loss paper. Requirements P

Flask API Example An example project showing a simple endpoints like a login/logout function and maybe some others. How to use: Open up your IDE (or u

Fastapi + MLflow + streamlit Setup env. I hope I covered all. pip install -r requirements.txt Start app Go in the root dir and run these Streamlit str

WithPartial Introduction WithPartial is a simple utility for functional piping in Python. The package exposes a context manager (used with with) calle

IQNAS: Interpretable Integer Quadratic programming Neural Architecture Search Realistic use of neural networks often requires adhering to multiple con

Use the generator for the range function! installation method: pip install yrange How to use: First import yrange in your application. You can then wo

Physion: Evaluating Physical Prediction from Vision in Humans and Machines This repo contains code and data to reproduce the results in our paper, Phy

Web app to predict closing stock prices in real time using Facebook's Prophet time series algorithm with a multi-variate, single-step time series forecasting strategy.

ec2-imagebuilder-ami-share CloudFormation template and CDK stack that contains a CustomResource with Lambda function to allow the setting of the targe

LDNet Author: Wen-Chin Huang (Nagoya University) Email: [email protected] This is the official implementation of the paper "LDNet

Hand-Object Contact Prediction (BMVC2021) This repository contains the code and data for the paper "Hand-Object Contact Prediction via Motion-Based Ps

Permeability-Prediction-Via-Multi-Scale-3D-CNN Data: The raw CT rock cores are obtained from the Imperial Colloge portal. The CT rock cores are sub-sa

peptides.py Physicochemical properties and indices for amino-acid sequences. 🗺️ Overview peptides.py is a pure-Python package to compute common descr

Parameter Prediction for Unseen Deep Architectures (NeurIPS 2021) authors: Boris Knyazev, Michal Drozdzal, Graham Taylor, Adriana Romero-Soriano Overv

Price Prediction with Recurrent Neural Networks LSTMs BTC-USD price prediction with deep learning algorithm. Artificial Neural Networks specifically L

Rethinking Transformer-based Set Prediction for Object Detection Here are the code for the ICCV paper. The code is adapted from Detectron2 and AdelaiD

[NeurIPS 2021 Spotlight] HELP: Hardware-adaptive Efficient Latency Prediction for NAS via Meta-Learning [Paper] This is Official PyTorch implementatio

PG2Net PG2Net:Personalized and Group Preference Guided Network for Next Place Prediction Datasets Experiment results on two Foursquare check-in datase

Understanding the network formation pattern for better link prediction Authors: [email protected] [email protected] Overview: Link prediction using M

Simultaneous Demand Prediction and Planning Dependencies Python packages: Pytorch, scikit-learn, Pandas, Numpy, PyYAML Data POI: data/poi Road network

LDNet Author: Wen-Chin Huang (Nagoya University) Email: [email protected] This is the official implementation of the paper "LDNet

Graph2SMILES A graph-to-sequence model for one-step retrosynthesis and reaction outcome prediction. 1. Environmental setup System requirements Ubuntu:

HF2-VAD Offcial implementation of "A Hybrid Video Anomaly Detection Framework via Memory-Augmented Flow Reconstruction and Flow-Guided Frame Predictio

Wafer Fault Detection using MlOps Integration This is an end to end machine learning project with MlOps integration for predicting the quality of wafe

Diabetes Prediction with Logistic Regression Exploratory Data Analysis Data Preprocessing Model & Prediction Model Evaluation Model Validation: Holdou

DMBGN: Deep Multi-Behaviors Graph Networks for Voucher Redemption Rate Prediction The implementation of the accepted paper "Deep Multi-Behaviors Graph

MGNN-SPred This is our Tensorflow implementation for the paper: WenWang,Wei Zhang, Shukai Liu, Qi Liu, Bo Zhang, Leyu Lin, and Hongyuan Zha. 2020. Bey

Focal Frequency Loss - Official PyTorch Implementation This repository provides the official PyTorch implementation for the following paper: Focal Fre

Paint Transformer: Feed Forward Neural Painting with Stroke Prediction [Paper] [Official Paddle Implementation] [Huggingface Gradio Demo] [Unofficial

Salary-Prediction-with-Machine-Learning 1. Business Problem Can a machine learning project be implemented to estimate the salaries of baseball players

Non-Autoregressive Translation with Layer-Wise Prediction and Deep Supervision Training Efficiency We show the training efficiency of our DSLP model b

CORS Bypass Proxy Cloud Function

Finger is a function symbol recognition engine for binary programs

Rethinking Transformer-based Set Prediction for Object Detection Here are the code for the ICCV paper. The code is adapted from Detectron2 and AdelaiD

Non-Autoregressive Translation with Layer-Wise Prediction and Deep Supervision Training Efficiency We show the training efficiency of our DSLP model b

Companion code for "Bayesian logistic regression for online recalibration and revision of risk prediction models with performance guarantees" Installa

Variational Graph Auto-encoder in Pytorch This repository implements variational graph auto-encoder by Thomas Kipf. For details of the model, refer to

Motif-based Graph Self-Supervised Learning for Molecular Property Prediction Official Pytorch implementation of NeurIPS'21 paper "Motif-based Graph Se

The leading use-case for the staircase package is for the creation and analysis of step functions. Pretty exciting huh. But don't hit the close button

Bangalore-House-Price-Prediction An end-to-end regression problem of predicting the price of properties in Bangalore. Deployed in Heroku using Flask.

Relation Prediction as an Auxiliary Training Objective for Knowledge Base Completion This repo provides the code for the paper Relation Prediction as

A graph neural network (GNN) model to predict protein-protein interactions (PPI) with no sample features

A geometric deep learning pipeline for predicting protein interface contacts.

Telco Customer Churn Prediction - Plotly Dash Application Description This dash application allows you to predict telco customer churn using machine l

IDA Pattern Search by Argus Cyber Security Ltd. The IDA Pattern Search plugin adds a capability of finding functions according to bit-patterns into th

Adaptive Task-Relational Context (ATRC) This repository provides source code for the ICCV 2021 paper Exploring Relational Context for Multi-Task Dense

VectorNet Re-implementation This is the unofficial pytorch implementation of CVPR2020 paper "VectorNet: Encoding HD Maps and Agent Dynamics from Vecto

RealTime Sign Language Detection using Action Recognition Approach Real-Time Sign Language is commonly predicted using models whose architecture consi

Table of Contents: Introduction to Torch's Tensor Library Computation Graphs and Automatic Differentiation Deep Learning Building Blocks: Affine maps,

functorch is a prototype of JAX-like composable function transforms for PyTorch.

This is a fork of Fairseq(-py) with implementations of the following models: Pervasive Attention - 2D Convolutional Neural Networks for Sequence-to-Se

Implementation of Deep-Forecast using PyTorch Deep Forecast: Deep Learning-based Spatio-Temporal Forecasting Adapted from original implementation Setu

RGN2-Replica (WIP) To eventually become an unofficial working Pytorch implementation of RGN2, an state of the art model for MSA-less Protein Folding f

FaPN: Feature-aligned Pyramid Network for Dense Image Prediction [arXiv] [Project Page] @inproceedings{ huang2021fapn, title={{FaPN}: Feature-alig