Python Protein-function-prediction Resources

07_Python_Advanced_Topics Introduction 👋 In this tutorial, you will learn about: Python Iterators: They are objects that can be iterated upon. In thi

93_Python_Data_Analytics_Projects This repository contains all the data analytics projects that I've worked on in python. No. Name 01 001_Cervical_Can

Molecular Docking integrated in Jupyter Notebooks Description | Citation | Installation | Examples | Limitations | License Table of content Descriptio

RITA: a Study on Scaling Up Generative Protein Sequence Models RITA is a family of autoregressive protein models, developed by a collaboration of Ligh

Fixing Malfunctional Objects With Learned Physical Simulation and Functional Prediction Figure 1. Teaser. Introduction This paper studies the problem

LAV Learning from All Vehicles Dian Chen, Philipp Krähenbühl CVPR 2022 (also arXiV 2203.11934) This repo contains code for paper Learning from all veh

Pancakeswap Sniper Bot PancakeSwap sniper bot. Automated sniping bot to snipe crypto coin launches. How it works The sniping bot can be used in three

ChemRxiv | [Paper] XXX DeepStruc Welcome to DeepStruc, a Deep Generative Model (DGM) that learns the relation between PDF and atomic structure and the

Project summary This repository contains the implementation of my bachelor degree project. The aim of the project is to apply non-linear feature reduc

SystemSix is an e-Ink "desk accessory" running on a Raspberry Pi. It is a bit of nostalgia that can function as a calendar, display the weather, the c

UTMOS: UTokyo-SaruLab MOS Prediction System Official implementation of "UTMOS: UTokyo-SaruLab System for VoiceMOS Challenge 2022" submitted to INTERSP

Protein GLM (wip) Implementation of a protein autoregressive language model, but with autoregressive infilling objective (editing subsequences capabil

MKGFormer Code for the SIGIR 2022 paper "Hybrid Transformer with Multi-level Fusion for Multimodal Knowledge Graph Completion" Model Architecture Illu

GVP Transformer (wip) Implementation of the GVP-Transformer, which was used in the paper Learning inverse folding from millions of predicted structure

Generating 3D Molecules for Target Protein Binding This is the official implementation of the GraphBP method proposed in the following paper. Meng Liu

Smooth ReLU in PyTorch Unofficial PyTorch reimplementation of the Smooth ReLU (SmeLU) activation function proposed in the paper Real World Large Scale

Molecular Nodes 🧬 🔬 💻 Buy Me a Coffee to Keep Development Going! Join a Community of Blender SciVis People! What is Molecular Nodes? Molecular Node

Attention-based CNN-LSTM and XGBoost hybrid model for stock prediction Requirements The code has been tested running under Python 3.7.4, with the foll

Note: This repo is adpoted from https://github.com/UNIMIBInside/Smart-Mobility-Prediction. Due to technical reasons, I did not fork their code. Introd

Description: ProtFeat is designed to extract the protein features by employing POSSUM and iFeature python-based tools. ProtFeat includes a total of 39

oneFace is a Python library for automatically generating multiple interfaces(CLI, GUI, WebGUI) from a callable Python object. oneFace is an easy way t

OpenSea Bulk Uploader And Trader 100000 NFTs (MAC WINDOWS ANDROID LINUX) Automatically and massively upload and sell your non-fungible tokens on OpenS

MAU (NeurIPS2021) Zheng Chang, Xinfeng Zhang, Shanshe Wang, Siwei Ma, Yan Ye, Xinguang Xiang, Wen GAo. Official PyTorch Code for "MAU: A Motion-Aware

DLWP: Deep Learning Weather Prediction DLWP is a Python project containing data-

Lottery Purchase Prediction Model Objective and Goal Predict the lottery type th

hydrotoolbox is a Python script for hydrologic calculations and analysis or by function calls within Python.

05.income-prediction Predict the income for each percentile of the population (Python) - FRENCH Effectuez une prédiction de revenus Prérequis Pour ce

AllSet This is the repo for our paper: You are AllSet: A Multiset Function Framework for Hypergraph Neural Networks. We prepared all codes and a subse

TGIN Tensorflow implementation of our method: "Triangle Graph Interest Network for Click-through Rate Prediction". Files in the folder dataset/ electr

EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein

Deeply Supervised, Layer-wise Prediction-aware (DSLP) Transformer for Non-autoregressive Neural Machine Translation

Price Prediction model is used to develop an LSTM model to predict the future market price of Bitcoin and Ethereum.

B4PPI Benchmarking Pipeline for the Prediction of Protein-Protein Interactions How this benchmarking pipeline has been built, and how to use it, is de

A programme which basically has the same function as the actual Rock paper scissors game.

HiPAL Code for KDD'22 Applied Data Science Track submission -- HiPAL: A Deep Framework for Physician Burnout Prediction Using Activity Logs in Electro

Nonlinear Optimization Algorithms During my time as Scientific Assistant at the Karlsruhe Institute of Technology (Germany) I implemented various Opti

A Numba-based two-point correlation function (2PCF) calculator using a grid decomposition. Like Corrfunc, but written in Numba, with simplicity and hackability in mind.

Gpu-Monitor A Python function for Slurm, where I couldn't use nvidia-smi to monitor the GPU information. whole repo is not finish Installation TODO Mo

polyprotein_stats A small tool to test and visualize protein embeddings and amino acid proportions. Currently deployed on streamlit.io. Given a set of

Source code for EquiDock: Independent SE(3)-Equivariant Models for End-to-End Rigid Protein Docking (ICLR 2022) Please cite "Independent SE(3)-Equivar

Hybrid Machine learning Model Clone the Repository Create a new Directory as assests and download the model from the below link Model Link To Start th

This python library predicts the punctuation of English, Italian, French and German texts. We developed it to restore the punctuation of transcribed spoken language.

This machine learning model was developed for House Prices - Advanced Regression Techniques competition in Kaggle by using several machine learning models such as Random Forest, XGBoost and LightGBM.

Built various Machine Learning algorithms (Logistic Regression, Random Forest, KNN, Gradient Boosting and XGBoost. etc). Structured a custom ensemble model and a neural network. Found a outperformed model for heart failure prediction accuracy of 88 percent.

Temporal Alignment Prediction for Supervised Representation Learning and Few-Shot Sequence Classification Introduction. This package includes the pyth

R-YOLOv4 This is a PyTorch-based R-YOLOv4 implementation which combines YOLOv4 model and loss function from R3Det for arbitrary oriented object detect

VOODOO Revealing supercooled liquid beyond lidar attenuation Explore the docs » Report Bug · Request Feature Table of Contents About The Project Built

Project1_Next-Quarter-Game-Design-Prediction What games should I design next quarter? 상황 : 게임회사 데이터팀 합류 문제 : '다음 분기에 어떤 게임을 설계해야할까' Data Description N

CovidcasePrediction A machine learning model for Covid case prediction Problem Statement Using regression algorithms we can able to track the active c

GraphNLI: A Graph-based Natural Language Inference Model for Polarity Prediction in Online Debates Vibhor Agarwal, Sagar Joglekar, Anthony P. Young an

Introduction This git repo contains the implementation of my ML project on Heart Disease Prediction. This is a real-world machine learning model/proje

SSWS-loss_function_based_on_MS-TCN Supervised Sliding Window Smoothing Loss Function Based on MS-TCN for Video Segmentation Supervised Sliding Window

GoldNanoparticles This GitHub repo consists of Code and Some results of project- Diabetes Treatment using Gold nanoparticles. These Consist of ML Mode

TRINIT_Hum_kuchh_nahi_karenge_ML01 Document Link https://github.com/Jatin-Goyal-552/TRINIT_Hum_kuchh_nahi_karenge_ML01/blob/main/hum_kuchh_nahi_kareng

To-Be is a machine learning challenge on CodaLab Platform about Mortality Prediction. The challenge aims to adress the problems of medical imbalanced data classification.

Driver Analysis with Factors and Forests: An Automated Data Science Tool using Python 📊

GNN_PPI Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction". Lear

Breast-Cancer-Prediction Trying to predict whether the cancer is benign or malignant using REGRESSION MODELS in Python. Team Members NAME ROLL-NUMBER

Deep Inertial Prediction For more information and context related to this repo, please refer to our website. Getting Started (non Docker) Note: you wi

Most Simple & Powefull Trade Bot (WINDOWS LINUX) What Are Some Pros And Cons Of Owning A Sniper Bot? While having a sniper bot is typically an advanta

I have collected data about a set of patients, all of whom suffered from the same illness. During their course of treatment, each patient responded to one of 5 medications, Drug A, Drug B, Drug c, Drug x and y. Part of our job is to build a model to find out which drug might be appropriate for a future patient with the same illness. The feature sets of this dataset are Age, Sex, Blood Pressure, and Cholesterol of patients, and the target is the drug that each patient responded to.

SpiroMask: Measuring Lung Function Using Consumer-Grade Masks Anonymised repository for paper submitted for peer review at ACM HEALTH (October 2021).

OntoProtein This is the implement of the paper "OntoProtein: Protein Pretraining With Ontology Embedding". OntoProtein is an effective method that mak

ReLSO Improved Fitness Optimization Landscapes for Sequence Design Description Citation How to run Training models Original data source Description In

CSPML (crystal structure prediction with machine learning-based element substitution) CSPML is a unique methodology for the crystal structure predicti

This model involves Insurance bill prediction, which was subsequently deployed on Heroku PaaS

This project aim was to predict the price of houses in the Boston area during the great financial crisis through regression, as well as classify houses into different quality categories according to their features. For this we used a kaggle data set.

Predictive_Modelling Gems & Holiday Package Prediction This project is based on 2 cases studies : Gems Price Prediction and Holiday Package prediction

Machine_Learning Election Exit Poll Prediction and U.S.A Presidential Speech Analysis using Machine Learning This project is based on 2 case-studies:

LERP : Label-dependent and event-guided interpretable disease risk prediction using EHRs This is the code for the LERP. Dataset The dataset used is MI

Pairwise Learning for Neural Link Prediction for OGB (PLNLP-OGB) This repository provides evaluation codes of PLNLP for OGB link property prediction t

The current workflow simulates brain functional connectivity (FC) from structural connectivity (SC) with a neural mass model. Gradient descent is applied to optimize the parameters in the neural mass model.

Banglore House Prediction Using Flask Server (Python) 🌐 Links 🌐 📂 Repo In this repository, I've implemented a Machine Learning-based Bangalore Hous

DTCN This is the implementation of our paper "Sequential Prediction of Social Me

gptrun Don't feel like coding today? Use the power of GPT3 to execute any function inside your programs just by giving some doctests. How is this diff

Multimodal Co-Attention Transformer (MCAT) for Survival Prediction in Gigapixel Whole Slide Images [ICCV 2021] © Mahmood Lab - This code is made avail

ICCV Workshop 2021 VTGAN This code is for our paper "VTGAN: Semi-supervised Retinal Image Synthesis and Disease Prediction using Vision Transformers"

Equipped customers with insights about their EVs Hourly energy consumption and helped predict future charging behavior using LSTM model. Designed sample dashboard with insights and recommendation for customers.

Flight Fare Prediction: Table of Content Demo Overview Motivation Installation Deployement on Heroku Directory Tree Bug / Feature Request Future scope

Diabetes Prediction Using Decision Tree Introduction Decision tree is the most powerful and popular tool for classification and prediction. A Decision

DTCN This is the implementation of our paper "Sequential Prediction of Social Me

AWS Lambda Function This repository contains python codes that allow notificatio

HistoSeg : Quick attention with multi-loss function for multi-structure segmentation in digital histology images Histological Image Segmentation This

Neuron class provides LNU (Linear Neural Unit), QNU (Quadratic Neural Unit), RBF (Radial Basis Function), MLP (Multi Layer Perceptron), MLP-ELM (Multi Layer Perceptron - Extreme Learning Machine) neurons learned with Gradient descent or LeLevenberg–Marquardt algorithm

This is a project for analysis and estimation of House Prices in King County USA The .csv file contains the data of the house and the .ipynb file con

A machine learning project that predicted binding sites of AP1 transcription factor, using ChIP-Seq data and local DNA shape information.

PROTEIN-EXPRESSION-ANALYSIS-FOR-DOWN-SYNDROME Down syndrome (DS) is a chromosomal disorder where organisms have an extra chromosome 21, sometimes know

A research on image classification and auto insurance claim prediction, a systematic experiments on modeling techniques and approaches

Starter code: Kaggle Toxic Comment Classification Challenge More competitions 🎇 Check collection of public projects 🎁 , where you can find multiple

django-fbv Utilities to make Django function-based views cleaner, more efficient, and better tasting. 💥 📖 Complete documentation: https://django-fbv

The aim of the mini project is predict whether or not a passenger survived based on attributes such as their age, sex, passenger class, where they embarked and more.

Fantasy-Points-Prediction-and-Dream-Team-Formation Collected Data from open source resources that have over 100 Parameters for predicting cricket play

Pseudo-Random On a whim I asked myself the question about how randomness is integrated into an algorithm? So I started the adventure by trying to code

Social network advertising, also social media targeting, is a group of terms that are used to describe forms of online advertising that focus on social networking services.

Mortality risk prediction for COVID-19 patients using XGBoost models Using demographic and lab test data received from the HM Hospitales in Spain, I b

Pose Transformers: Human Motion Prediction with Non-Autoregressive Transformers This is the repo used for human motion prediction with non-autoregress

Custom function scheduler TUI (text-based user interface) in the console

Simple function to plot multiple barplots in the same figure. Supports padding and custom color.

IMDB Success Predictor Project involves Web Scraping custom IMDB data between 2020 and 2021 of 10000 movies and shows sorted by number of votes ,fine

Multi-future Trajectory Prediction The project is about using the Multiverse model to make possible multible-future trajectory prediction for a seen p