Python Biological-data-analysis Resources

O-CNN This repository contains the implementation of our papers related with O-CNN. The code is released under the MIT license. O-CNN: Octree-based Co

Purpose These scripts allow you to record mocap data to, and play from .csv files. This approach facilitates parsing of body movement data in statisti

Python package for analyzing sensor-collected human motion data

Motion Reconstruction Code and Data for Skills from Videos (SFV) This repo contains the data and the code for motion reconstruction component of the S

demir.ai Dataset Operations With this application, you can have the empty values (nan/null) deleted or filled before giving your dataset to machine le

Itchio Downloader Tool Install pip install git+https://github.com/emersont1/itchio Download All Games in library from account python -m itchio.downloa

BSD 3-Clause License Copyright (c) 2020, Mike Bromberek All rights reserved. ProcessWorkout Exercise data is exported in JSON format to iCloud using

COVID-19 in Howell County, Missouri This repository contains the daily data files used to generate my COVID-19 dashboard for Howell County, Missouri,

Social Sentiment Dash Application Live-streaming sentiment analysis application created with Python and Dash, hosted at SocialSentiment.net. Dash Tuto

Political elections, appointment, analysis and visualization in Python poli-sci-kit is a Python package for political science appointment and election

BERT, LDA, and TFIDF based keyword extraction in Python kwx is a toolkit for multilingual keyword extraction based on Google's BERT and Latent Dirichl

Data-viz utils 📈 Functions for data visualization in matplotlib 📚 API Can be installed using pip install dvu and then imported with import dvu. You

xMCA | Maximum Covariance Analysis in Python The aim of this package is to provide a flexible tool for the climate science community to perform Maximu

Ps: we are adding transformer model soon Text Gen 🐐 Almost State-of-the-art Text Generation library Text gen is a python library that allow you build

timemachines Autonomous, univariate, k-step ahead time-series forecasting functions assigned Elo ratings You can: Use some of the functionality of a s

jBrain Software associated with the AAAI 2022 paper Francesco D'Amore, Daniel Mitropolsky, Pierluigi Crescenzi, Emanuele Natale, Christos H. Papadimit

Blockchain-enabled Server-less Federated Learning Repository containing the files used to reproduce the results of the publication "Blockchain-enabled

Imagine by Reasoning: A Reasoning-Based Implicit Semantic Data Augmentation for Long-Tailed Classification Prerequisite PyTorch = 1.2.0 Python3 torch

ARKitScenes This repo accompanies the research paper, ARKitScenes - A Diverse Real-World Dataset for 3D Indoor Scene Understanding Using Mobile RGB-D

Awesome Human Motion 🏃‍♀️ A curated list about human motion capture, analysis and synthesis. Contents Introduction Human Models Datasets Data Process

holiday-star balena ❤️ adafruitIO Introduction A DiY holiday project to demonstrate how you can send data from adafruitIO cloud to a balena edge devic

Hangman A hangman game that I created. Thanks to Data Flair for giving me the code! Run python3 hangman.py in a terminal if you have Python 3. Please

How useful is the aswer? A Streamlit web-app for a data-science project that aims to evaluate if the answer to a question is helpful. If you want to l

DataShare - Simple library for data sharing between scripts and public functions calling. Installation. Install code, Delete LICENSE, README, readme.t

Multi-Language-RTVC stands for Multi-Language Real Time Voice Cloning and is a Voice Cloning Tool capable of transfering speaker-specific audio featur

Data-Efficient GANs with DiffAugment project | paper | datasets | video | slides Generated using only 100 images of Obama, grumpy cats, pandas, the Br

SeqLike - flexible biological sequence objects in Python Introduction A single object API that makes working with biological sequences in Python more

Automation on Legal Court Cases Review This project is to automate the case review on legal case documents and find the most critical cases using netw

About The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficien

Table of Contents Sherpa License How To Install Sherpa Using Anaconda Using pip Building from source History Release History Sherpa Sherpa is a modeli

A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.

crypto-candlesticks 📈 The goal behind this project is to facilitate downloading cryptocurrency candlestick data fast & simple. Currently only the Bit

Label Studio for Hugging Face's Transformers Website • Docs • Twitter • Join Slack Community Transfer learning for NLP models by annotating your textu

Synchrosqueezing is a powerful reassignment method that focuses time-frequency representations, and allows extraction of instantaneous amplitudes and frequencies

A hyper-fast, safe Python module to read and write JSON data. Works as a drop-in replacement for Python's built-in json module. This is alpha software

Codes-for-Algorithms Codes for realizing theories learned from Data Mining, Machine Learning, Deep Learning without using the present Python packages.

A model that attempts to learn and benefit from data collected on card counting. A decision tree like model is built to win more often than loose and increase the bet of the player appropriately to come out winning as much money as possible.

Overcooked-AI We suppose to apply traditional offline reinforcement learning technique to multi-agent algorithm. In this repository, we implemented be

irispreppy For radiometrically calibrating and PSF deconvolving IRIS data. I dislike how I need to own proprietary software (IDL) just to simply prepa

Data 25 Star Wars Project Instructions The character data in your MongoDB database has been pulled from https://swapi.tech/. As well as 'people', the

Dust-model-dichotomous-performance-analysis Using a collated dataset of 90,000 dust point source observations from 9 drylands studies from around the

cc_net Tools to download and clean Common Crawl as introduced in our paper CCNet. If you found these resources useful, please consider citing: @inproc

A State-of-the-Art Large-scale Pretrained Response Generation Model (DialoGPT) This repository contains the source code and trained model for a large-

Weather Clock for Raspberry PI This project is a dashboard for Raspberry Pi to display environmental weather data, rain radar, weather forecast, etc.

FTLNet_Pytorch Pytorch codes for Feature Transfer Learning for Face Recognition with Under-Represented Data 1. Introduction This repo is an unofficial

RangeLoss Pytorch This is a Pytorch reproduction of Range Loss, which is proposed in paper 《Range Loss for Deep Face Recognition with Long-Tailed Trai

Deep Abstract Networks A pyTorch implementation for AAAI-2022 paper DANets: Deep Abstract Networks for Tabular Data Classification and Regression. Bri

This is a repository for all hackerank challenges kindly note this is for learning purposes and if you wish to contribute, dont hesitate all submision

Behavioural-Cloning-in-autonomous-driving Using CNN to mimic the driver based on training data from Torcs. Approach First, the data was collected from

Stock-Market-AI-Analysis I dont mind anyone using this code but please give me credit A program that uses an API and a AI model to get info of stocks

Snapchat "Memories" Fetcher In compliance with the California Consumer Privacy Act of 2018 (“CCPA”), businesses which collect and store user data must

An ipywidgets wrapper of regular-table for Jupyter. Examples Two Billion Rows Notebook Click Events Notebook Edit Events Notebook Styling Notebook Pan

Hist Hist is an analyst-friendly front-end for boost-histogram, designed for Python 3.7+ (3.6 users get version 2.4). See what's new. Installation You

Overview This project uses historical baseball games data to calculate an Elo-like rating for MLB teams based on regular season match ups. The Elo rat

Sentiment Analysis Sentiment analysis in computational linguistics is a general term for techniques that quantify sentiment or mood in a text. Can you

Charset Detection, for Everyone 👋 The Real First Universal Charset Detector A library that helps you read text from an unknown charset encoding. Moti

Bangla Number in Words Converts a Bangla numeric string to literal words. Install $ pip install banglanum2words Usage

Kaggle-Comp.-Data-Mining Kaggle Competition using 15 numerical predictors to predict a continuous outcome as part of a final project for a stats data

WASP2 (Currently in pre-development): Allele-specific pipeline for unbiased read mapping(WIP), QTL discovery(WIP), and allelic-imbalance analysis Requ

TransLink Spatial Data What: TransLink is the statutory public transit authority for the Metro Vancouver region. This GitHub repository is a collectio

Selenium job to automate queries to check last posts of Module Data Structures & Algorithms Web-testing for course Data Structures & Algorithms Struct

Robbing the FED: Directly Obtaining Private Data in Federated Learning with Modified Models This repo contains a barebones implementation for the atta

Eto Labs Python SDK This is the python SDK for Eto, the AI focused data platform for teams bringing AI models to production. The python SDK makes it e

iDracPowerMonitorMQTT This script publishes iDrac power draw data for iDrac 6 enabled servers to an MQTT broker. This can be used to integrate the pow

Semi-Supervised Data Programming for Data Efficient Machine Learning SPEAR is a library for data programming with semi-supervision. The package implem

Aspect-Category-Opinion-Sentiment (ACOS) Quadruple Extraction This repo contains the data sets and source code of our paper: Aspect-Category-Opinion-S

Self-Supervised Learning (SimCLR) with Biological Plausible Image Augmentations Official code base for the poster "On the use of Cortical Magnificatio

HETU Documentation | Examples Hetu is a high-performance distributed deep learning system targeting trillions of parameters DL model training, develop

pandas is a Python package that provides fast, flexible, and expressive data structures designed to make working with "relational" or "labeled" data both easy and intuitive.

An OrderedSet is a mutable data structure that is a hybrid of a list and a set. It remembers the order of its entries, and every entry has an index number that can be looked up.

phantom-types Phantom types for Python will help you make illegal states unrepresentable and avoid shotgun parsing by enabling you to practice "Parse,

pytest-mypy-testing — Plugin to test mypy output with pytest pytest-mypy-testing provides a pytest plugin to test that mypy produces a given output. A

SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration

Clustergram Visualization and diagnostics for cluster analysis Clustergram is a diagram proposed by Matthias Schonlau in his paper The clustergram: A

Estoult Estoult is a Python toolkit for data mapping with an integrated query builder for SQL databases. It currently supports MySQL, PostgreSQL, and

Realtime Financial Market Data Visualization and Analysis Introduction This repo shows my project about real-time stock data pipeline. All the code is

SPARK JOINS This project is to perform inner, all outer joins and semi joins. create_df.py: load_data.py : helps to put data into Spark data frames. d

The yt Project yt is an open-source, permissively-licensed Python library for analyzing and visualizing volumetric data. yt supports structured, varia

The collaboration platform for Machine Learning MLReef is an open source ML-Ops platform that helps you collaborate, reproduce and share your Machine

GebPy is a Python-based, open source tool for the generation of geological data of minerals, rocks and complete lithological sequences. The data can be generated randomly or with respect to user-defined constraints, for example a specific element concentration within minerals and rocks or the order of units within a complete lithological profile.

Clustering Clustering Application in Python Using scikit-learn This repository contains the prediction of baseball metric clusters using MLB Statcast

DataSelection-NMT Selecting Parallel In-domain Sentences for Neural Machine Translation Using Monolingual Texts Quick update: The paper got accepted o

FinRL-Meta: A Universe of Market Environments. FinRL-Meta is a universe of market environments for data-driven financial reinforcement learning. Users

Centroid UNet - Locating Object Centroids in Aerial/Serial Images Introduction Centroid-UNet is deep neural network model to detect centroids from Aer

gACSON gACSON software is to visualize, segment, and analyze the morphology of neurons in three-dimensional electron microscopy images. If you use any

BiCAT This is our TensorFlow implementation for the paper: "BiCAT: Sequential Recommendation with Bidirectional Chronological Augmentation of Transfor

datamodel-code-generator This code generator creates pydantic model from an openapi file and others. Help See documentation for more details. Supporte

Wooey is a simple web interface to run command line Python scripts. Think of it as an easy way to get your scripts up on the web for routine data anal

RDFLib RDFLib is a pure Python package for working with RDF. RDFLib contains most things you need to work with RDF, including: parsers and serializers

aiortc What is aiortc? aiortc is a library for Web Real-Time Communication (WebRTC) and Object Real-Time Communication (ORTC) in Python. It is built o

Titanic-data-analysis This Repo is an analysis on Titanic_mod.csv This csv file contains some assumed data of the Titanic ship after sinking This full

The Python-Weather-App is a service that provides weather data, including current weather data to the developers of web services and mobile applications.

frida-ceserver frida-based ceserver. iOS analysis is possible with Cheat Engine. Original by Dark Byte. Usage Install python library. pip install pack

AITom Introduction AITom is an open-source platform for AI driven cellular electron cryo-tomography analysis. AITom is originated from the tomominer l

Privacy-Aware Inverse RL (PRIL) Analysis Framework Code, environments, and scripts for the paper: "How Private Is Your RL Policy? An Inverse RL Based

# microsoft azure # https://docs.microsoft.com/en-us/cli/azure/install-azure-cli az account set --subscription [] az aks get-credentials --resource-g

PyPowSyBl The PyPowSyBl project gives access PowSyBl Java framework to Python developers. This Python integration relies on GraalVM to compile Java co

Easy-ERA5-Trck Easy-ERA5-Trck Galleries Install Usage Repository Structure Module Files Version iteration Easy-ERA5-Trck is a super lightweight Lagran

WEATHER FORECASTING ACROSS THE WORLD Overview Python scripts were created to visualize the weather for over 500 cities across the world at varying di

maup maup is the geospatial toolkit for redistricting data. The package streamlines the basic workflows that arise when working with blocks, precincts