Python Brain-tumor-segmentation Resources

Specialized project Created by Katrine Nguyen and Martin Wangen-Eriksen as a part of our specialized project at Norwegian University of Science and Te

Hypernet-Ensemble Learning of Segmentation Probability for Medical Image Segmentation with Ambiguous Labels The implementation of Hypernet-Ensemble Le

The Large Labelled Logo Dataset (L3D): A Multipurpose and Hand-Labelled Continuously Growing Dataset Website: https://lhf-labs.github.io/tm-dataset Da

Deep Levelset for Box-supervised Instance Segmentation in Aerial Images Wentong Li, Yijie Chen, Wenyu Liu, Jianke Zhu* Any questions or discussions ar

Winning submission to the 2021 Brain Tumor Segmentation Challenge This repo contains the codes and pretrained weights for the winning submission to th

RegSeg The official implementation of "Rethink Dilated Convolution for Real-time Semantic Segmentation" Paper: arxiv D block Decoder Setup Install the

rastrainer rastrainer is a QGIS plugin to training remote sensing semantic segmentation model based on PaddlePaddle. UI TODO Init UI. Add Block. Add l

BT-Unet: A-Self-supervised-learning-framework-for-biomedical-image-segmentation-using-Barlow-Twins Deep learning has brought most profound contributio

3D CT Scan Segmentation With Occupancy Network This repo implements a 3D superresolution segmentation task for an airport baggage dataset. Our final p

bbc-speech-segmenter: Voice Activity Detection & Speaker Diarization A complete speech segmentation system using Kaldi and x-vectors for voice activit

SM-PPM This is a Pytorch implementation of our paper "Style Mixing and Patchwise Prototypical Matching for One-Shot Unsupervised Domain Adaptive Seman

Winning submission to the 2021 Brain Tumor Segmentation Challenge This repo contains the codes and pretrained weights for the winning submission to th

Implicit Feature Refinement for Instance Segmentation This repository is an official implementation of the ACM Multimedia 2021 paper Implicit Feature

SOLO: Segmenting Objects by Locations This project hosts the code for implementing the SOLO algorithms for instance segmentation. SOLO: Segmenting Obj

Implementation of our ECCV 2020 paper The Devil is in Classification: A Simple Framework for Long-tail Instance Segmentation This repo contains code o

A Strong Single-Stage Baseline for Long-Tailed Problems This project provides a strong single-stage baseline for Long-Tailed Classification (under Ima

Imbalaced Classification and Robust Semantic Segmentation This repo implements two algoritms. The imbalance clibration (IC) algorithm for image classi

Image-Level or Object-Level? A Tale of Two Resampling Strategies for Long-Tailed Detection Figure 1: Our proposed Resampling at image-level and obect-

MosaicOS Mosaic of Object-centric Images as Scene-centric Images (MosaicOS) for long-tailed object detection and instance segmentation. Introduction M

NorCal Normalization Calibration (NorCal) for Long-Tailed Object Detection and Instance Segmentation On Model Calibration for Long-Tailed Object Detec

Generative Zero-Shot Learning for Semantic Segmentation of 3D Point Clouds Björn Michele1), Alexandre Boulch1), Gilles Puy1), Maxime Bucher1) and Rena

Hashtag segmentation is the task of automatically inserting the missing spaces between the words in a hashtag. Hashformers applies Transformer models

Deep Levelset for Box-supervised Instance Segmentation in Aerial Images Wentong Li, Yijie Chen, Wenyu Liu, Jianke Zhu* This code is based on MMdetecti

H2G-Net This repository contains the code relevant for the proposed design H2G-Net, which was introduced in the manuscript "Hybrid guiding: A multi-re

Graph WaveNet for brain network analysis This is the implementation of the Graph WaveNet model used in our manuscript: S. Wein , A. Schüller, A. M. To

ClothingSegmenter U2NET fashion image/clothing segmenter based on https://github.com/levindabhi/cloth-segmentation Overview The ClothingSegmenter exec

Perturbed Self-Distillation: Weakly Supervised Large-Scale Point Cloud Semantic Segmentation (ICCV2021) This is the implementation of PSD (ICCV 2021),

U-Net Brain Tumor Segmentation 🚀 ：Feb 2019 the data processing implementation in this repo is not the fastest way (code need update, contribution is

TF-Unet General purpose U-Network implemented in Keras for image segmentation Getting started • Training • Evaluation Getting started Looking for Jupy

Reliable Propagation-Correction Modulation for Video Object Segmentation (AAAI22) Preview version paper of this work is available at: https://arxiv.or

Predicting Axillary Lymph Node Metastasis in Early Breast Cancer Using Deep Learning on Primary Tumor Biopsy Slides Project | This repo is the officia

PolyphonicFormer: Unified Query Learning for Depth-aware Video Panoptic Segmentation Winner method of the ICCV-2021 SemKITTI-DVPS Challenge. [arxiv] [

Label-Efficient Semantic Segmentation with Diffusion Models Official implementation of the paper Label-Efficient Semantic Segmentation with Diffusion

A paper Introduction This is an official release of the paper Separate Contrastive Learning for Organs-at-Risk and Gross-Tumor-Volume Segmentation wit

Reliable Propagation-Correction Modulation for Video Object Segmentation (AAAI22) Preview version paper of this work is available at: https://arxiv.or

Grouped SSD (GSSD) for liver lesion detection from multi-phase CT Note: the MICCAI 2018 paper only covers the multi-phase lesion detection part of thi

Efficient Two-Step Networks for Temporal Action Segmentation This repository provides a PyTorch implementation of the paper Efficient Two-Step Network

Self-Supervised Generative Style Transfer for One-Shot Medical Image Segmentation This repository contains the Pytorch implementation of the proposed

WaveGrad Implementation (PyTorch) of Google Brain's high-fidelity WaveGrad vocoder (paper). First implementation on GitHub with high-quality generatio

Panoptic SegFormer: Delving Deeper into Panoptic Segmentation with Transformers Results results on COCO val Backbone Method Lr Schd PQ Config Download

COCO-Stuff 10K dataset v1.1 (outdated) Holger Caesar, Jasper Uijlings, Vittorio Ferrari Overview Welcome to official homepage of the COCO-Stuff [1] da

Chinese Word Vectors 中文词向量 中文 This project provides 100+ Chinese Word Vectors (embeddings) trained with different representations (dense and sparse),

Train neural network for semantic segmentation (deep lab V3) with pytorch in 50 lines of code Train net semantic segmentation net using Trans10K datas

TransFGU: A Top-down Approach to Fine-Grained Unsupervised Semantic Segmentation Zhaoyun Yin, Pichao Wang, Fan Wang, Xianzhe Xu, Hanling Zhang, Hao Li

PartImageNet: A Large, High-Quality Dataset of Parts We will release our dataset and scripts soon after cleaning and approval. Introduction PartImageN

Mask2Former: Masked-attention Mask Transformer for Universal Image Segmentation Bowen Cheng, Ishan Misra, Alexander G. Schwing, Alexander Kirillov, Ro

TransFGU: A Top-down Approach to Fine-Grained Unsupervised Semantic Segmentation Zhaoyun Yin, Pichao Wang, Fan Wang, Xianzhe Xu, Hanling Zhang, Hao Li

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

FCN-pytorch-easiest Trying to be the easiest FCN pytorch implementation and just in a get and use fashion Here I use a handbag semantic segmentation f

Semantic segmentation using Tensorflow eager execution Requirement Python 2.7+ Tensorflow-gpu OpenCv H5py Scikit-learn Numpy Imgaug Train with eager e

Website • Docs • Twitter • Join Slack Community What is Label Studio? Label Studio is an open source data labeling tool. It lets you label data types

M2MRF: Many-to-Many Reassembly of Features for Tiny Lesion Segmentation in Fundus Images This repo is the official implementation of paper "M2MRF: Man

Depth Clustering This is a fast and robust algorithm to segment point clouds taken with Velodyne sensor into objects. It works with all available Velo

DAFormer: Improving Network Architectures and Training Strategies for Domain-Adaptive Semantic Segmentation [Arxiv] [Paper] As acquiring pixel-wise an

Multi-template MRI mouse brain atlas (both in vivo and ex vivo) Mouse Brain MRI atlas (both in-vivo and ex-vivo) (repository relocated from the origin

Can fMRI reveal the representation of syntactic structure in the brain? The code base for our paper on understanding syntactic representations in the

Deep Neural Mouse Brain Modeling This is the repository for the ongoing deep neural mouse modeling project, an attempt to characterize the representat

MatrixProfile MatrixProfile is a Python 3 library, brought to you by the Matrix Profile Foundation, for mining time series data. The Matrix Profile is

Mask R-CNN for Object Detection and Segmentation This is an implementation of Mask R-CNN on Python 3, Keras, and TensorFlow. The model generates bound

BMVOS This is the official implementation of Pixel-Level Bijective Matching for Video Object Segmentation, to appear in WACV 2022. @article{cho2021pix

CPN (ICCV2021) This is an implementation of Complementary Patch for Weakly Supervised Semantic Segmentation, which is accepted by ICCV2021 poster. Thi

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

End-to-End Referring Video Object Segmentation with Multimodal Transformers This repo contains the official implementation of the paper: End-to-End Re

Res2Net for Instance segmentation and Object detection using MaskRCNN Since the MaskRCNN-benchmark of facebook is deprecated, we suggest to use our mm

Enet This is a realtime segmentation net with almost 22 fps on GTX1080 ti, and the model size is very small with only 28M. This repo contains the infe

Efficient networks for Computer Vision This repo contains source code of our work on designing efficient networks for different computer vision tasks:

Bonnet: An Open-Source Training and Deployment Framework for Semantic Segmentation in Robotics. By Andres Milioto @ University of Bonn. (for the new P

SPCL SPCL: A New Framework for Domain Adaptive Semantic Segmentation via Semantic Prototype-based Contrastive Learning Update on 2021/11/25: ArXiv Ver

Efficient Multi-Organ Segmentation Using SpatialConfiguartion-Net with Low GPU Memory Requirements Our implementation used for the MICCAI 2021 FLARE C

Codebase for Amodal Segmentation through Out-of-Task andOut-of-Distribution Generalization with a Bayesian Model

BlenderProc2 A procedural Blender pipeline for photorealistic rendering. Documentation | Tutorials | Examples | ArXiv paper | Workshop paper Features

PointCNN: Convolution On X-Transformed Points Created by Yangyan Li, Rui Bu, Mingchao Sun, Wei Wu, Xinhan Di, and Baoquan Chen. Introduction PointCNN

Python asymptotic Partial Directed Coherence and Directed Coherence estimation package for brain connectivity analysis. Free software: MIT license Doc

LaneNet-Lane-Detection Use tensorflow to implement a Deep Neural Network for real time lane detection mainly based on the IEEE IV conference paper "To

Alfred Alfred is command line tool for deep-learning usage. if you want split an video into image frames or combine frames into a single video, then a

Learning to Disambiguate Strongly Interacting Hands via Probabilistic Per-Pixel Part Segmentation [3DV 2021 Oral] Learning to Disambiguate Strongly In

BANA This is the implementation of the paper "Background-Aware Pooling and Noise-Aware Loss for Weakly-Supervised Semantic Segmentation". For more inf

Learning Pixel-level Semantic Affinity with Image-level Supervision This code is deprecated. Please see https://github.com/jiwoon-ahn/irn instead. Int

Welcome to labelpix 👋 labelpix is a graphical image labeling interface for drawing bounding boxes. 🏠 Homepage Install pip install -r requirements.tx

Boundary-Guided-Context-Aggregation Boundary Guided Context Aggregation for Semantic Segmentation Haoxiang Ma, Hongyu Yang, Di Huang In BMVC'2021 Pape

Numbering permanent and deciduous teeth via deep instance segmentation in panoramic X-rays In this repo, you will find the instructions on how to requ

PCAN for Multiple Object Tracking and Segmentation This is the offical implementation of paper PCAN for MOTS. We also present a trailer that consists

CelebAMask-HQ [Paper] [Demo] CelebAMask-HQ is a large-scale face image dataset that has 30,000 high-resolution face images selected from the CelebA da

RandLA-Net: Efficient Semantic Segmentation of Large-Scale Point Clouds (CVPR 2020) This is the official implementation of RandLA-Net (CVPR2020, Oral

AutoML for Image Semantic Segmentation Currently this repo contains the only working open-source implementation of Auto-Deeplab which, by the way out-

Region-aware Contrastive Learning for Semantic Segmentation, ICCV 2021 Abstract Recent works have made great success in semantic segmentation by explo

Introduction English | 简体中文 MMOCR is an open-source toolbox based on PyTorch and mmdetection for text detection, text recognition, and the correspondi

English | 简体中文 Documentation: https://mmtracking.readthedocs.io/ Introduction MMTracking is an open source video perception toolbox based on PyTorch.

ICCVW21-TradiCV-Survey-of-LiDAR-Cluster Motivation In contrast to popular end-to-end deep learning LiDAR panoptic segmentation solutions, we propose a

Semantic Meshes A framework for annotating 3D meshes using the predictions of a 2D semantic segmentation model. Paper If you find this framework usefu

PyTorch Semantic Segmentation Introduction This repository is a PyTorch implementation for semantic segmentation / scene parsing. The code is easy to

Complete-IoU Loss and Cluster-NMS for Improving Object Detection and Instance Segmentation. Our paper is accepted by IEEE Transactions on Cybernetics

Detectron2 trained on PubLayNet dataset This repo contains the training configurations, code and trained models trained on PubLayNet dataset using Det

BMaskR-CNN This code is developed on Detectron2 Boundary-preserving Mask R-CNN ECCV 2020 Tianheng Cheng, Xinggang Wang, Lichao Huang, Wenyu Liu Video

BiMix The code for Bi-Mix: Bidirectional Mixing for Domain Adaptive Nighttime Semantic Segmentation arxiv Framework: visualization results: Requiremen

ClevrTex This repository contains dataset generation code for ClevrTex benchmark from paper: ClevrTex: A Texture-Rich Benchmark for Unsupervised Multi

CFPNet-M: A Light-Weight Encoder-Decoder Based Network for Multimodal Biomedical Image Real-Time Segmentation This repository contains the implementat

Introduction The field of connectomics aims to reconstruct the wiring diagram of the brain by mapping the neural connections at the level of individua

SegDistill: Toolbox for Knowledge Distillation on Semantic Segmentation Networks This repo contains the supported code and configuration files for Seg

Cellpose | A generalist algorithm for cell and nucleus segmentation. Cellpose was written by Carsen Stringer and Marius Pachitariu. To learn about Cel