Python Graph-analysis Resources

Overview Metrinome is an all-purpose tool for working with code complexity metrics. It can be used as both a REPL and API, and includes: Converters to

freud Overview The freud Python library provides a simple, flexible, powerful set of tools for analyzing trajectories obtained from molecular dynamics

pymwp: MWP analysis in Python pymwp is a tool for automatically performing static analysis on programs written in C, inspired by "A Flow Calculus of m

Py2neo Py2neo is a client library and toolkit for working with Neo4j from within Python applications. The library supports both Bolt and HTTP and prov

Office365 (Microsoft365) audit log analysis tool The header describes it all WHY?? The first line of code was written long time before other colleague

This is an example of how to automate Ridit Analysis for a dataset with large amount of questions and many item attributes

Analysis of cross-lingual citations in English papers Contents initial_analysis Source code, data, and evaluation details as published at ICADL2020 ci

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

MassFormer This is the original implementation of MassFormer, a graph transformer for small molecule MS/MS prediction. Check out the preprint on arxiv

Homepage | Paper | Datasets | Leaderboard | Documentation Graph Robustness Benchmark (GRB) provides scalable, unified, modular, and reproducible evalu

BeatNet A package for music online and offline rhythmic information analysis including music Beat, downbeat, tempo and meter tracking. This repository

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

GDN A tensorflow=1.13 implementation of Deconvolutional Networks on Graph Data (NeurIPS 2021) Abstract In this paper, we consider an inverse problem i

Efficient electromagnetic solver based on rigorous coupled-wave analysis for 3D and 2D multi-layered structures with in-plane periodicity, such as gratings, photonic-crystal slabs, metasurfaces, surface-emitting lasers, nano-antennas, and more.

Obsei is a low code AI powered automation tool. It can be used in various business flows like social listening, AI based alerting, brand image analysis, comparative study and more .

4CAT: Capture and Analysis Toolkit 4CAT is a research tool that can be used to analyse and process data from online social platforms. Its goal is to m

Robocop Introduction Documentation Values Requirements Installation Usage Example Robotidy FAQ Watch our talk from RoboCon 2021 about Robocop and Robo

SGMNet Implementation PyTorch implementation of SGMNet for ICCV'21 paper "Learning to Match Features with Seeded Graph Matching Network", by Hongkai C

Human Trajectory Prediction via Counterfactual Analysis (CausalHTP) The official PyTorch code implementation of "Human Trajectory Prediction via Count

Adversarial Attacks on Knowledge Graph Embeddings via Instance Attribution Methods This is the code repository to accompany the EMNLP 2021 paper on ad

VFedPCA+VFedAKPCA This is the official source code for the Paper: Vertical Federated Principal Component Analysis and Its Kernel Extension on Feature-

meddlr Getting Started Meddlr is a config-driven ML framework built to simplify medical image reconstruction and analysis problems. Installation To av

Exploring aircraft accidents in Brazil Occurrencies with aircraft in Brazil are investigated by the Center for Investigation and Prevention of Aircraf

About Unsub is a collection analysis tool that assists libraries in analyzing their journal subscriptions. The tool provides rich data and a summary g

cLoops2: full stack analysis tool for chromatin interactions Introduction cLoops2 is an extension of our previous work, cLoops. From loop-calling base

reorder_python_imports Tool for automatically reordering python imports. Similar to isort but uses static analysis more. Installation pip install reor

MARIO Multifunctional Analysis of Regions through Input-Output. (Documents) What is it MARIO is a python package for handling input-output tables and

Package Description The difficulties in acquiring spectroscopic data have been a major challenge for supernova surveys. snlstm is developed to provide

A real data analysis and modeling project - restaurant inspections Jafar Pourbemany 9/27/2021 This project represents data analysis and modeling of re

Principal Component Analysis Principal Component Analysis (PCA) is a dimension-reduction algorithm. The idea is to use the singular value decompositio

Exploratory data analysis An Exploratory data analysis APP TAPIWA CHAMBOKO 🚀 About Me I'm a full stack developer experienced in deploying artificial

edaSQL is a python library to bridge the SQL with Exploratory Data Analysis where you can connect to the Database and insert the queries. The query results can be passed to the EDA tool which can give greater insights to the user.

StDashApp Stock Analysis Dashboard Using Streamlit and Python If you found the content useful and want to support my work, you can buy me a coffee! Th

CaGCN This repo is for source code of NeurIPS 2021 paper "Be Confident! Towards Trustworthy Graph Neural Networks via Confidence Calibration". Paper L

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

ADGCL : Adversarial Graph Augmentation to Improve Graph Contrastive Learning Introduction This repo contains the Pytorch [1] implementation of Adversa

craiglist-helper synopsis Perform sentiment analysis and keyword extraction on Craigslist listings Background I love Craigslist. I've found most of my

ocropy OCRopus is a collection of document analysis programs, not a turn-key OCR system. In order to apply it to your documents, you may need to do so

logdata-anomaly-miner This tool parses log data and allows to define analysis pipelines for anomaly detection. It was designed to run the analysis wit

waltlabtools A collection of tools for biomedical research assay analysis in Python. Key Features Analysis for assays such as digital ELISA, including

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

Summary This is the source code for the paper "A Case Study and Qualitative Analysis of Simple Cross-Lingual Opinion Mining", which was accepted as fu

Graph-Refined Convolutional Network for Multimedia Recommendation with Implicit Feedback This is our Pytorch implementation for the paper: Yinwei Wei,

Caboto Caboto, the Kubernetes semantic analysis toolkit. It contains a lightweight Python library for semantic analysis of plain Kubernetes manifests

RHGN Source code for CIKM 2021 paper for Relation-aware Heterogeneous Graph for User Profiling Dependencies torch==1.6.0 torchvision==0.7.0 dgl==0.7.1

uber-pickups-analysis Data Source: https://www.kaggle.com/fivethirtyeight/uber-pickups-in-new-york-city Information about data set The dataset contain

Virtual-Artificial-Intelligence-genesis- I created My own Virtual Artificial Intelligence named genesis, He can assist with my Tasks and also perform

A lightweight and powerful python module for scientific analysis and visualization of 3d objects.

Cold Brew: Distilling Graph Node Representations with Incomplete or Missing Neighborhoods Introduction Graph Neural Networks (GNNs) have demonstrated

Edge Independent Graph Models Code for the paper: "On the Power of Edge Independent Graph Models" Sudhanshu Chanpuriya, Cameron Musco, Konstantinos So

FinEAS: Financial Embedding Analysis of Sentiment 📈 (SentenceBERT for Financial News Sentiment Regression) This repository contains the code for gene

IGCN : Image-to-graph convolutional network IGCN is a learning framework for 2D/3D deformable model registration and alignment, and shape reconstructi

Jump Reward Inference for 1D Music Rhythmic State Spaces An implementation of the probablistic jump reward inference model for music rhythmic informat

RMNA: A Neighbor Aggregation-Based Knowledge Graph Representation Learning Model Using Rule Mining Our code is based on Learning Attention-based Embed

Data and Code for paper Outlining and Filling: Hierarchical Query Graph Generation for Answering Complex Questions over Knowledge Graph is available f

Git repositoty of the manuscript entitled Statistical quantification of confounding bias in predictive modelling by Tamas Spisak The manuscript descri

DAGSurv Survival analysis (SA) is a well-known statistical technique for the study of temporal events. In SA, time-to-an-event data is modeled using a

DSP: Trajectory Prediction with Graph-based Dual-scale Context Fusion Introduction This is the project page of the paper Lu Zhang, Peiliang Li, Jing C

Installation Setup with Conda # create a new environment conda create --name insightKface python=3.7 # or over conda activate insightKface #install t

Auto-ML tool specialized in detecting of outliers Description This tool will allows you, with a Dash visualization, to compare 10 models of machine le

Diverse Motion Stylization (Official) This is the official Pytorch implementation of this paper. Diverse Motion Stylization for Multiple Style Domains

MalanaNeuralNetwork Description Malware Analysis Neural Network project. Table of Contents Getting Started Requirements Installation Clone Set-Up VENV

Developed an optimized algorithm which finds the most optimal path between 2 points in a 3D Maze using various AI search techniques like BFS, DFS, UCS, Greedy BFS and A*. The algorithm was extremely optimal running in ~15s to ~30s for search spaces as big as 10000000 nodes where a set of 18 actions could be performed at each node in the 3D Maze.

uber-pickups-analysis Data Source: https://www.kaggle.com/fivethirtyeight/uber-pickups-in-new-york-city Information about data set The dataset contain

DiscoNet: Learning Distilled Collaboration Graph for Multi-Agent Perception [NeurIPS 2021] Yiming Li, Shunli Ren, Pengxiang Wu, Siheng Chen, Chen Feng

A large-scale database for graph representation learning

Datacleaning datacleaning tools for Business analysis This program is made for Vicky's work. You can use it, too. 数据清洗 该数据清洗工具是为了商业分析 这个程序是为了Vicky的工作而

deeptime Releases: Installation via conda recommended. conda install -c conda-forge deeptime pip install deeptime Documentation: deeptime-ml.github.io

UltraGCN This is our Pytorch implementation for our CIKM 2021 paper: Kelong Mao, Jieming Zhu, Xi Xiao, Biao Lu, Zhaowei Wang, Xiuqiang He. UltraGCN: A

GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily Abstract Graph Neural Networks (GNNs) are widely used on a

Digital Twin Mobility Profiling: A Spatio-Temporal Graph Learning Approach This is the implementation of traffic prediction code in DTMP based on PyTo

stock-graph-python Simple GUI python app to show a stocks graph performance. Made with Matplotlib and Tiingo. Tiingo API Key You will need to add your

ELFXtract ELFXtract is an automated analysis tool used for enumerating ELF binaries Powered by Radare2 and r2ghidra This is specially developed for PW

py-image-dedup is a tool to sort out or remove duplicates within a photo library. Unlike most other solutions, py-image-dedup intentionally uses an approximate image comparison to also detect duplicates of images that slightly differ in resolution, color or other minor details.

Fast and Easy-to-use Distributed Graph Learning for PyTorch Geometric

MsfMania MsfMania is a command line tool developed in Python that is designed to bypass antivirus software on Windows and Linux/Mac in the future. Sum

Plag Description A CLI Application to detect plagiarism in Source Code Files. Features Compare source code files for plagiarism. Extract code features

Ansible Playbook Grapher ansible-playbook-grapher is a command line tool to create a graph representing your Ansible playbook plays, tasks and roles.

Jupyter Pylinter A simple tool to extract python code from a Jupyter notebook, and then run pylint on it for static analysis. If you find this tool us

Graph Regularized Residual Subspace Clustering Network for hyperspectral image clustering

Heterogeneous Temporal Graph Neural Network This repository contains the datasets and source code of HTGNN. run_mag.ipynb is the training and testing

Pytorch Classification A general, feasible and extensible framework for 2D image classification. Features Easy to configure (model, hyperparameters) T

Learning Graph Cellular Automata This code implements the experiments from the NeurIPS 2021 paper: "Learning Graph Cellular Automata" Daniele Grattaro

BMVC 2021 BI-GConv: Boundary-Aware Input-Dependent Graph Convolution for Biomedical Image Segmentation Necassary Dependencies: PyTorch 1.2.0 Python 3.

VACA Code repository for the paper "VACA: Designing Variational Graph Autoencoders for Interventional and Counterfactual Queries (arXiv)". The impleme

Rot-Pro : Modeling Transitivity by Projection in Knowledge Graph Embedding This repository contains the source code for the Rot-Pro model, presented a

Node Dependent Local Smoothing for Scalable Graph Learning Requirements Environments: Xeon Gold 5120 (CPU), 384GB(RAM), TITAN RTX (GPU), Ubuntu 16.04

MedMNIST Project (Website) | Dataset (Zenodo) | Paper (arXiv) | MedMNIST v1 (ISBI'21) Jiancheng Yang, Rui Shi, Donglai Wei, Zequan Liu, Lin Zhao, Bili

SparseCard Code for approximate graph reduction techniques for cardinality-based DSFM, from paper "Approximate Decomposable Submodular Function Minimi

Implementation for On Provable Benefits of Depth in Training Graph Convolutional Networks Setup This implementation is based on PyTorch = 1.0.0. Smal

SMORE: Knowledge Graph Completion and Multi-hop Reasoning in Massive Knowledge Graphs SMORE is a a versatile framework that scales multi-hop query emb

Hierarchical User Intent Graph Network for Multimedia Recommendation This is our Pytorch implementation for the paper: Hierarchical User Intent Graph

pcnaDeep-napari A customized interface for single cell track visualisation based on pcnaDeep and napari. 👀 Under construction You can get test image

LightLog Introduction LightLog is an open source deep learning based lightweight log analysis tool for log anomaly detection. Function description [BG

CRISPR-detector Here we propose our CRISPR-detector to facilitate the CRISPR-edited amplicon and whole genome sequencing data analysis, with functions

Video Matting via Consistency-Regularized Graph Neural Networks Project Page | Real Data | Paper Installation Our code has been tested on Python 3.7,

Implementation of Apriori Algorithm for Association Analysis

Spatial Interpolation Toolbox This is the home to Spatial Interpolation Toolbox, a graphical user interface (GUI) for interpolating geographic vector

Predicting lncRNA–protein interactions based on graph autoencoders and collaborative training Code for our paper "Predicting lncRNA–protein interactio

Bendford analysis of Ethereum transaction The python script script.py extract from already downloaded archive file the ethereum transaction. The value