Python Spectral-clustering Resources

MST++: Multi-stage Spectral-wise Transformer for Efficient Spectral Reconstruction (CVPRW 2022) Yuanhao Cai, Jing Lin, Zudi Lin, Haoqian Wang, Yulun Z

MarcoPolo is a method to discover differentially expressed genes in single-cell RNA-seq data without depending on prior clustering Overview MarcoPolo

Aiming at the common training datsets split, spectrum preprocessing, wavelength select and calibration models algorithm involved in the spectral analysis process, a complete algorithm library is established, which is named opensa (openspectrum analysis).

Multi-view graph embedding clustering network: Joint self-supervision and block diagonal representation Simple implementation of our paper MVGC. The d

frbmclust Getting Started Clusterize FRB profiles using hierarchical clustering,

SGMC: Spectral Graph Matrix Completion Code for AAAI21 paper "Scalable and Explainable 1-Bit Matrix Completion via Graph Signal Learning". Data Format

TopClus The source code used for Topic Discovery via Latent Space Clustering of Pretrained Language Model Representations, published in WWW 2022. Requ

RE results graph visualization and company clustering Installation pip install -r requirements.txt python -m nltk.downloader stopwords python3.7 main.

py-self-organizing-maps Simple implementation of self-organizing maps (SOMs) A SOM is an unsupervised method for learning a mapping from a discrete ne

CLASSIX Fast and explainable clustering based on sorting CLASSIX is a fast and explainable clustering algorithm based on sorting. Here are a few highl

Dictionary Learning for Clustering on Hyperspectral Images Overview Framework for Spectral Clustering on the Sparse Coefficients of Learned Dictionari

python scripts to perform coin die clustering (performed on Riedones3D).

Crypto Portfolio Clustering Crypto Portfolio Clustering with and without optimization techniques (elbow method, PCA). Analysis This is an anlysis of c

Dimensionality Reduction + Clustering + Unsupervised Score Metrics Introduction

Nowadays we don't have time to listen to each and every song that we come across in a playlist. so, this project helps you. we used Spotify API for collecting the dataset information and able to do EDA and used K- means clustering technique and created new playlists in Spotify again.

Inspectral Spectral decomposition for characterizing long-range interaction prof

Moroccan Stocks Clustering Context Hey! we don't always have to forecast time series am I right ? We use k-means to cluster about 70 moroccan stock pr

Why Spectral Normalization Stabilizes GANs: Analysis and Improvements [paper (NeurIPS 2021)] [paper (arXiv)] [code] Authors: Zinan Lin, Vyas Sekar, Gi

Visual Clustering Clustering is a popular approach to detect patterns in unlabeled data. Existing clustering methods typically treat samples in a data

Multi-View Clustering Papers Collections for the lasted paper about multi-view clustering methods (papers, codes). There also exists some repositories

XRDidentifier Pytorch implementation of XRD spectral identification from COD database. Details will be explained in the paper to be submitted to NeurI

Band-Adaptive Spectral-Spatial Feature Learning Neural Network for Hyperspectral Image Classification

SI_EXPLAINER_tg_bot This bot is an assistant for medical professionals in interpreting the results of patient clustering. ABOUT This chatbot was devel

This project has Classification and Clustering done Via kNN and K-Means respectfully. It later tests its efficiency via F1/accuracy/recall/precision for kNN and Davies-Bouldin Index for Clustering. The Data is also visually represented.

SMYRF: Efficient attention using asymmetric clustering Get started: Abstract We propose a novel type of balanced clustering algorithm to approximate a

Instance segmentation by jointly optimizing spatial embeddings and clustering bandwidth This codebase implements the loss function described in: Insta

Python Machine Learning Jupyter Notebooks (ML website) Dr. Tirthajyoti Sarkar, Fremont, California (Please feel free to connect on LinkedIn here) Also

Master the essential skills needed to recognize and solve complex real-world problems with Machine Learning and Deep Learning by leveraging the highly popular Python Machine Learning Eco-system.

OutliersSlidingWindows A Java implementation of the experiments for the paper "k-Center Clustering with Outliers in Sliding Windows" Dataset generatio

clustering-laion400m Script and models for clustering LAION-400m CLIP embeddings. Models were fit on the first million or so image embeddings. A subje

TICC TICC is a python solver for efficiently segmenting and clustering a multivariate time series. It takes as input a T-by-n data matrix, a regulariz

Welcome to the dtw-python package Comprehensive implementation of Dynamic Time Warping algorithms. DTW is a family of algorithms which compute the loc

pypmc pypmc is a python package focusing on adaptive importance sampling. It can be used for integration and sampling from a user-defined target densi

DAT8 Course Repository Course materials for General Assembly's Data Science course in Washington, DC (8/18/15 - 10/29/15). Instructor: Kevin Markham (

Learn how to process, classify, cluster, summarize, understand syntax, semantics and sentiment of text data with the power of Python! This repository contains code and datasets used in my book, Text Analytics with Python published by Apress/Springer.

Unsupervised Learning - K-Means Clustering and Hierarchical Clustering - The Heritage Foundation's Economic Freedom Index Analysis 2019 - By David Sal

This repository contains code which implements the Stochastic Gaussian Mixture Model (S-GMM) for event-based datasets Dependencies CMake Premake4 Blaz

Machine learning approaches for localized lockdown, subnotification analysis and cases forecasting in São Paulo state counties during COVID-19 pandemi

Overview Customer Segmentation is one the most important applications of unsupervised learning. Using clustering techniques, companies can identify th

benchmark_spaces Benchmarks of how well different two dimensional spaces work fo

NLP T5 Project proposal Topic Modeling and Clustering of News-Articles-and-Essays Students: Nasser Alshehri Abdullah Bushnag Abdulrhman Alqurashi OVER

PyTorch Implementation of SSTN for Hyperspectral Image Classification Paper links: SSTN published on IEEE T-GRS. Also, you can directly find the imple

Strongly local p-norm-cut algorithms for semi-supervised learning and local graph clustering

SPECTRUM : Spectral Analysis in Python contributions: Please join https://github.com/cokelaer/spectrum contributors: https://github.com/cokelaer/spect

Self-labelling via simultaneous clustering and representation learning 🆗 🆗 🎉 NEW models (20th August 2020): Added standard SeLa pretrained torchvis

Learning to Classify Images without Labels This repo contains the Pytorch implementation of our paper: SCAN: Learning to Classify Images without Label

UX Analytics & A/B Testing

PyTASER PyTASER is a Python (3.9+) library and set of command-line tools for classifying spectral features in bulk materials, post-DFT. The goal of th

FastSpecFit Introduction This repository contains code and documentation to perform fast, simple spectral synthesis and emission-line fitting of DESI

A Parameter-free Deep Embedded Clustering Method for Single-cell RNA-seq Data Overview Clustering analysis is widely utilized in single-cell RNA-seque

img2palette Turning images into '9-pan' palettes using KMeans clustering from sklearn. Requirements We require: Pillow, for opening and processing ima

CUSTOMER SEGMENTATION COHORT RFM CLUSTERING TỔNG QUAN VỀ HỆ THỐNG DỮ LIỆU Nên chuyển qua theme màu dark thì sẽ nhìn đẹp hơn https://customer-segmentat

Industrial Image Anomaly Localization Based on Gaussian Clustering of Pre-trained Feature Q. Wan, L. Gao, X. Li and L. Wen, "Industrial Image Anomaly

A python package that extends Google Earth Engine GitHub: https://github.com/davemlz/eemont Documentation: https://eemont.readthedocs.io/ PyPI: https:

Hierarchical Clustering: O(1)-Approximation for Well-Clustered Graphs This repository contains code to accompany the paper "Hierarchical Clustering: O

Dual Correlation Reduction Network An official source code for paper Deep Graph Clustering via Dual Correlation Reduction, accepted by AAAI 2022. Any

Clustering Clustering Application in Python Using scikit-learn This repository contains the prediction of baseball metric clusters using MLB Statcast

PyIOmica (pyiomica) This repository contains PyIOmica, a Python package that provides bioinformatics utilities for analyzing (dynamic) omics datasets.

A simple API for working with University of California, Irvine (UCI) Machine Learning (ML) repository Table of Contents Introduction About Page of the

Autoencoders pretraining using clustering

clustimage The aim of clustimage is to detect natural groups or clusters of images. Image recognition is a computer vision task for identifying and ve

Depth Clustering This is a fast and robust algorithm to segment point clouds taken with Velodyne sensor into objects. It works with all available Velo

PC-SOS-SDP: an Exact Solver for Semi-supervised Minimum Sum-of-Squares Clustering PC-SOS-SDP is an exact algorithm based on the branch-and-bound techn

ground seg and clustering based on kitti velodyne data, and a additional optimized kdtree for knn and radius nn search

MatrixProfile MatrixProfile is a Python 3 library, brought to you by the Matrix Profile Foundation, for mining time series data. The Matrix Profile is

Repository for the paper "Graph Auto-Encoders for Financial Clustering" Requirements Python 3.6 torch torch_geometric Instructions This is a simple c

Self Supervised clusterer Combined IIC, and Moco architectures, with some SimCLR notions, to get state of the art unsupervised clustering while retain

BanditPAM: Almost Linear-Time k-Medoids Clustering This repo contains a high-performance implementation of BanditPAM from BanditPAM: Almost Linear-Tim

Sequence clustering and database creation using mmseqs, from local fasta files

ADGC: Awesome Deep Graph Clustering ADGC is a collection of state-of-the-art (SOTA), novel deep graph clustering methods (papers, codes and datasets).

ChebLieNet: Invariant spectral graph NNs turned equivariant by Riemannian geometry on Lie groups Hugo Aguettaz, Erik J. Bekkers, Michaël Defferrard We

ICCVW21-TradiCV-Survey-of-LiDAR-Cluster Motivation In contrast to popular end-to-end deep learning LiDAR panoptic segmentation solutions, we propose a

Tutela: an Ethereum and Tornado Cash Anonymity Tool The repo contains open-source code for Tutela, an anonymity tool for Ethereum and Tornado Cash use

Make Complex Heatmaps Complex heatmaps are efficient to visualize associations between different sources of data sets and reveal potential patterns. H

An open-source, low-code machine learning library in Python 🚀 Version 2.3.5 out now! Check out the release notes here. Official • Docs • Install • Tu

Faiss Faiss is a library for efficient similarity search and clustering of dense vectors. It contains algorithms that search in sets of vectors of any

Infomap Infomap is a network clustering algorithm based on the Map equation. For detailed documentation, see mapequation.org/infomap. For a list of re

Microscopium Unsupervised clustering and dataset exploration for high content screens. See microscopium in action Public dataset BBBC021 from the Broa

Unsupervised-Machine-Learning Flat Clustering K-Means clusternig example with Python and Scikit-learn Flat clustering Clustering algorithms group a se

sm_content_clustering A Python module for clustering creators of social media content into networks. Currently supports identifying potential networks

tf-SNDCGAN Tensorflow implementation of the paper "Spectral Normalization for Generative Adversarial Networks" (https://www.researchgate.net/publicati

Self Organising Map for Clustering of Atomistic Samples - V2 Description Self Organising Map (also known as Kohonen Network) implemented in Python for

HDBSCAN HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with Noise. Performs DBSCAN over varying epsilon values and integrates

pyclustering is a Python, C++ data mining library (clustering algorithm, oscillatory networks, neural networks). The library provides Python and C++ implementations (C++ pyclustering library) of each algorithm or model. C++ pyclustering library is a part of pyclustering and supported for Linux, Windows and MacOS operating systems.

FCPS Fundamental Clustering Problems Suite The package provides over sixty state-of-the-art clustering algorithms for unsupervised machine learning pu

Buckshot++: An Outlier-Resistant and Scalable Clustering Algorithm. (Inspired by the Buckshot Algorithm.) Here, we introduce a new algorithm, which we

tree-SNE t-SNE and hierarchical clustering are popular methods of exploratory data analysis, particularly in biology. Building on recent advances in s

MiniSom Self Organizing Maps MiniSom is a minimalistic and Numpy based implementation of the Self Organizing Maps (SOM). SOM is a type of Artificial N

Description Implements (high-dimenstional) clustering algorithm described in https://arxiv.org/pdf/1804.02624.pdf Dependencies python3 pytorch (=0.4)

Hyperbolic Hierarchical Clustering (HypHC) This code is the official PyTorch implementation of the NeurIPS 2020 paper: From Trees to Continuous Embedd

Spectral-spatial contrastive clustering (SSCC) Yaoming Cai, Yan Liu, Zijia Zhang, Zhihua Cai, and Xiaobo Liu, Large-scale Hyperspectral Image Clusteri

The Spectral Diagram (SD) is a new tool for the comparison of time series in the frequency domain. The SD provides a novel way to display the coherence function, power, amplitude, phase, and skill score of discrete frequencies of two time series. Each SD summarises these quantities in a single plot for multiple targeted frequencies.

SGTL - Spectral Graph Theory Library SGTL is a python library of spectral graph theory methods. The library is still very new and so there are many fe

Shape As Points (SAP) Paper | Project Page | Short Video (6 min) | Long Video (12 min) This repository contains the implementation of the paper: Shape

cLoops2: full stack analysis tool for chromatin interactions Introduction cLoops2 is an extension of our previous work, cLoops. From loop-calling base

DFSA Unofficial pytorch implementation of the ICCV 2021 paper "Dynamic High-Pass Filtering and Multi-Spectral Attention for Image Super-Resolution" (p

Lidar-Segementation An implementation on "Curved-Voxel Clustering for Accurate Segmentation of 3D LiDAR Point Clouds with Real-Time Performance" from

deeptime Releases: Installation via conda recommended. conda install -c conda-forge deeptime pip install deeptime Documentation: deeptime-ml.github.io

Graph Regularized Residual Subspace Clustering Network for hyperspectral image clustering

K Means Algorithm What is K Means This algorithm is an iterative algorithm that partitions the dataset according to their features into K number of pr