153 Repositories
Python drug-target-interactions Libraries
OOD Dataset Curator and Benchmark for AI-aided Drug Discovery
🔥 DrugOOD 🔥 : OOD Dataset Curator and Benchmark for AI Aided Drug Discovery This is the official implementation of the DrugOOD project, this is the
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.
Molecular Docking integrated in Jupyter Notebooks Description | Citation | Installation | Examples | Limitations | License Table of content Descriptio
In this project we combine techniques from neural voice cloning and musical instrument synthesis to achieve good results from as little as 16 seconds of target data.
Neural Instrument Cloning In this project we combine techniques from neural voice cloning and musical instrument synthesis to achieve good results fro
TigerLily: Finding drug interactions in silico with the Graph.
Drug Interaction Prediction with Tigerlily Documentation | Example Notebook | Youtube Video | Project Report Tigerlily is a TigerGraph based system de
A ssl analyzer which could analyzer target domain's certificate.
ssl_analyzer A ssl analyzer which could analyzer target domain's certificate. Analyze the domain name ssl certificate information according to the inp
Code Implementation of "Learning Span-Level Interactions for Aspect Sentiment Triplet Extraction".
Span-ASTE: Learning Span-Level Interactions for Aspect Sentiment Triplet Extraction ***** New March 31th, 2022: Scikit-Style API for Easy Usage *****
CompleX Group Interactions (XGI) provides an ecosystem for the analysis and representation of complex systems with group interactions.
XGI CompleX Group Interactions (XGI) is a Python package for the representation, manipulation, and study of the structure, dynamics, and functions of
A wordlist generator tool, that allows you to supply a set of words, giving you the possibility to craft multiple variations from the given words, creating a unique and ideal wordlist to use regarding a specific target.
A wordlist generator tool, that allows you to supply a set of words, giving you the possibility to craft multiple variations from the given words, creating a unique and ideal wordlist to use regarding a specific target.
Mailer is python3 script use for sending spear-phishing to target email...It was created by Spider Anongreyhat
Mailer Mailer is a python3 script. It's used for sending spear-phishing to target email...It was created by Spider Anongreyhat Screenshots Installatio
Official implementation of "Generating 3D Molecules for Target Protein Binding"
Generating 3D Molecules for Target Protein Binding This is the official implementation of the GraphBP method proposed in the following paper. Meng Liu
AoT is a system for automatically generating off-target test harness by using build information.
AoT: Auto off-Target Automatically generating off-target test harness by using build information. Brought to you by the Mobile Security Team at Samsun
Repository for "Improving evidential deep learning via multi-task learning," published in AAAI2022
Improving evidential deep learning via multi task learning It is a repository of AAAI2022 paper, “Improving evidential deep learning via multi-task le
EquiBind: Geometric Deep Learning for Drug Binding Structure Prediction
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
Negative Interactions for Improved Collaborative Filtering:
Negative Interactions for Improved Collaborative Filtering: Don’t go Deeper, go Higher This notebook provides an implementation in Python 3 of the alg
Benchmarking Pipeline for Prediction of Protein-Protein Interactions
B4PPI Benchmarking Pipeline for the Prediction of Protein-Protein Interactions How this benchmarking pipeline has been built, and how to use it, is de
GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
A Python based command line ARP Spoofer utility, which takes input as arguments for the exact target IP and gateway IP for which you wish to Spoof ARP request
A Python based command line ARP Spoofer utility, which takes input as arguments for the exact target IP and gateway IP for which you wish to Spoof ARP request
Detecting Human-Object Interactions with Object-Guided Cross-Modal Calibrated Semantics
[AAAI2022] Detecting Human-Object Interactions with Object-Guided Cross-Modal Calibrated Semantics Overall pipeline of OCN. Paper Link: [arXiv] [AAAI
Mapping Conditional Distributions for Domain Adaptation Under Generalized Target Shift
This repository contains the official code of OSTAR in "Mapping Conditional Distributions for Domain Adaptation Under Generalized Target Shift" (ICLR 2022).
Standalone script written in Python 3 for generating Reverse Shell one liner snippets and handles the communication between target and client using custom Netcat binaries
Standalone script written in Python 3 for generating Reverse Shell one liner snippets and handles the communication between target and client using custom Netcat binaries. It automates the boring stuff like URL encoding the command and setting up a listener.
Drug prediction
I have collected data about a set of patients, all of whom suffered from the same illness. During their course of treatment, each patient responded to one of 5 medications, Drug A, Drug B, Drug c, Drug x and y. Part of our job is to build a model to find out which drug might be appropriate for a future patient with the same illness. The feature sets of this dataset are Age, Sex, Blood Pressure, and Cholesterol of patients, and the target is the drug that each patient responded to.
Identifying a Training-Set Attack’s Target Using Renormalized Influence Estimation
Identifying a Training-Set Attack’s Target Using Renormalized Influence Estimation By: Zayd Hammoudeh and Daniel Lowd Paper: Arxiv Preprint Coming soo
A secure and customizable bot for controlling cross-server announcements and interactions within Discord
DiscordBot A secure and customizable bot for controlling cross-server announcements and interactions within Discord. Within the code of the bot, you c
A sample pytorch Implementation of ACL 2021 research paper "Learning Span-Level Interactions for Aspect Sentiment Triplet Extraction".
Span-ASTE-Pytorch This repository is a pytorch version that implements Ali's ACL 2021 research paper Learning Span-Level Interactions for Aspect Senti
Message commands extension for discord-py-interactions
interactions-message-commands Message commands extension for discord-py-interactions README IS NOT FINISHED YET BUT IT IS A GOOD START Installation pi
Minimalistic tool to visualize how the routes to a given target domain change over time, feat. Python 3.10 & mermaid.js
Minimalistic tool to visualize how the routes to a given target domain change over time, feat. Python 3.10 & mermaid.js
A malware to encrypt all the .txt and .jpg files in target computer using RSA algorithms
A malware to encrypt all the .txt and .jpg files in target computer using RSA algorithms. Change the Blackgound image of targets' computer. and decrypt the targets' encrypted files in our own computer
2021:"Bridging Global Context Interactions for High-Fidelity Image Completion"
TFill arXiv | Project This repository implements the training, testing and editing tools for "Bridging Global Context Interactions for High-Fidelity I
💊 A 3D Generative Model for Structure-Based Drug Design (NeurIPS 2021)
A 3D Generative Model for Structure-Based Drug Design Coming soon... Citation @inproceedings{luo2021sbdd, title={A 3D Generative Model for Structu
CHERRY is a python library for predicting the interactions between viral and prokaryotic genomes
CHERRY is a python library for predicting the interactions between viral and prokaryotic genomes. CHERRY is based on a deep learning model, which consists of a graph convolutional encoder and a link prediction decoder.
Huawei firewall automatically updates Chinese ip to target IP group.
Huawei firewall automatically updates Chinese ip to target IP group.
Two predictive attributes (Speed and Angle) and one attribute target (Power)
Two predictive attributes (Speed and Angle) and one attribute target (Power). A container crane has the function of transporting containers from one point to another point. The difficulty of this task lies in the fact that the container is connected to the bridge crane by cables causing an opening angle while the container is being transported, interfering with the operation at high speeds due to oscillation that occurs at the end point, which could cause accidents.
Repository for the paper : Meta-FDMixup: Cross-Domain Few-Shot Learning Guided byLabeled Target Data
1 Meta-FDMIxup Repository for the paper : Meta-FDMixup: Cross-Domain Few-Shot Learning Guided byLabeled Target Data. (ACM MM 2021) paper News! the rep
Space robot - (Course Project) Using the space robot to capture the target satellite that is disabled and spinning, then stabilize and fix it up
Space robot - (Course Project) Using the space robot to capture the target satellite that is disabled and spinning, then stabilize and fix it up
NLP techniques such as named entity recognition, sentiment analysis, topic modeling, text classification with Python to predict sentiment and rating of drug from user reviews.
This file contains the following documents sumbited for Baruch CIS9665 group 9 fall 2021. 1. Dataset: drug_reviews.csv 2. python codes for text classi
Skiller - With this payload you can control the target computer with (cmd)
Skiller - With this payload you can control the target computer with (cmd)
Natural Language Processing for Adverse Drug Reaction (ADR) Detection
Natural Language Processing for Adverse Drug Reaction (ADR) Detection This repo contains code from a project to identify ADRs in discharge summaries a
A discord.py extension for sending, receiving and handling ui interactions in discord
discord-ui A discord.py extension for using discord ui/interaction features pip package ▪ read the docs ▪ examples Introduction This is a discord.py u
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
NeoDTI NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions (Bioinformatics).
The code for SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network.
SAG-DTA The code is the implementation for the paper 'SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network'. Requirements py
Deleting someone else's Instagram account, repeat until the target account is blocked.
Program Features 📌 Instagram report V4. 📌 Coded with the latest version of Python. 📌 Has automatic scheduling. 📌 Full account report. 📌 Report a
A PyTorch based deep learning library for drug pair scoring.
Documentation | External Resources | Datasets | Examples ChemicalX is a deep learning library for drug-drug interaction, polypharmacy side effect and
DaProfiler allows you to get emails, social medias, adresses, works and more on your target using web scraping and google dorking techniques
DaProfiler allows you to get emails, social medias, adresses, works and more on your target using web scraping and google dorking techniques, based in France Only. The particularity of this program is its ability to find your target's e-mail adresses.
[ICCV 2021] Target Adaptive Context Aggregation for Video Scene Graph Generation
Target Adaptive Context Aggregation for Video Scene Graph Generation This is a PyTorch implementation for Target Adaptive Context Aggregation for Vide
Boilerplate template for the discord-py-interactions library
discord-py-interactions_boilerplate Boilerplate template for the discord-py-interactions library Currently, this boilerplate supports discord-py-inter
Neon: an add-on for making it easier to handle component interactions
Neon Neon is an add-on for Lightbulb making it easier to handle component interactions. Installation pip install git+https://github.com/neonjonn/light
Neon: an add-on for Lightbulb making it easier to handle component interactions
Neon Neon is an add-on for Lightbulb making it easier to handle component interactions. Installation pip install git+https://github.com/neonjonn/light
OpenSource Poc && Vulnerable-Target Storage Box.
reapoc OpenSource Poc && Vulnerable-Target Storage Box. We are aming to collect different normalized poc and the vulerable target to verify it. Now re
Systemic Evolutionary Chemical Space Exploration for Drug Discovery
SECSE SECSE: Systemic Evolutionary Chemical Space Explorer Chemical space exploration is a major task of the hit-finding process during the pursuit of
Rapid experimentation and scaling of deep learning models on molecular and crystal graphs.
LitMatter A template for rapid experimentation and scaling deep learning models on molecular and crystal graphs. How to use Clone this repository and
NewsMTSC: (Multi-)Target-dependent Sentiment Classification in News Articles
NewsMTSC: (Multi-)Target-dependent Sentiment Classification in News Articles NewsMTSC is a dataset for target-dependent sentiment classification (TSC)
Target Propagation via Regularized Inversion
Target Propagation via Regularized Inversion The present code implements an ideal formulation of target propagation using regularized inverses compute
Official PyTorch implementation for paper "Efficient Two-Stage Detection of Human–Object Interactions with a Novel Unary–Pairwise Transformer"
UPT: Unary–Pairwise Transformers This repository contains the official PyTorch implementation for the paper Frederic Z. Zhang, Dylan Campbell and Step
Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks
Decoding the Protein-ligand Interactions Using Parallel Graph Neural Networks Requirements python 0.10+ rdkit 2020.03.3.0 biopython 1.78 openbabel 2.4
A discord http interactions framework built on top of Sanic
snowfin An async discord http interactions framework built on top of Sanic Installing for now just install the package through pip via github # Unix b
Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models
Molecular Sets (MOSES): A benchmarking platform for molecular generation models Deep generative models are rapidly becoming popular for the discovery
Signs the target email up to over 1000 different mailing lists to get spammed each day.
Email Bomber Say goodbye to that email Features Signs up to over 1k different mailing lists Written in python so the program is lightweight Easy to us
Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2
CoaDTI Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2 Abstract Environment The test was conducted i
Multi-Agent Reinforcement Learning (MARL) method to learn scalable control polices for multi-agent target tracking.
scalableMARL Scalable Reinforcement Learning Policies for Multi-Agent Control CD. Hsu, H. Jeong, GJ. Pappas, P. Chaudhari. "Scalable Reinforcement Lea
A user reconnaisance tool that extracts a target's information from Instagram, DockerHub & Github.
A user reconnaisance tool that extracts a target's information from Instagram, DockerHub & Github. Also searches for matching usernames on Github.
The source code and dataset for the RecGURU paper (WSDM 2022)
RecGURU About The Project Source code and baselines for the RecGURU paper "RecGURU: Adversarial Learning of Generalized User Representations for Cross
A Python package to process & model ChEMBL data.
insilico: A Python package to process & model ChEMBL data. ChEMBL is a manually curated chemical database of bioactive molecules with drug-like proper
Defi PancakeSwap bot is programmed in Python to buy and sell tokens in seconds once the target is hit.
Defi PancakeSwap BOT A BOT that will make easy your life in Trading. Watch tutorial on Youtube Table of Contents About The Project Built With Getting
TraSw for FairMOT - A Single-Target Attack example (Attack ID: 19; Screener ID: 24):
TraSw for FairMOT A Single-Target Attack example (Attack ID: 19; Screener ID: 24): Fig.1 Original Fig.2 Attacked By perturbing only two frames in this
The learning agent learns firstly approaching to the football and then kicking the football to the target position
Football Court This project utilized Pytorch and Tensorflow so that the learning agent learns firstly approaching to the football and then kicking the
A small and fun Discord Bot that is written in Python and discord-interactions (with discord.py)
Articuno (discord-interactions) A small and fun Discord Bot that is written in Python and discord-interactions (with discord.py) Get started If you wa
An API wrapper for Discord written in Python.
disnake A modern, easy to use, feature-rich, and async ready API wrapper for Discord written in Python. About disnake All the contributors and develop
SHIFT15M: multiobjective large-scale fashion dataset with distributional shifts
[arXiv] The main motivation of the SHIFT15M project is to provide a dataset that contains natural dataset shifts collected from a web service IQON, wh
Discord Token Finder - Find half of your target's token with just their ID.
Discord Token Finder - Find half of your target's token with just their ID.
Implementation of the paper Scalable Intervention Target Estimation in Linear Models (NeurIPS 2021), and the code to generate simulation results.
Scalable Intervention Target Estimation in Linear Models Implementation of the paper Scalable Intervention Target Estimation in Linear Models (NeurIPS
Create large-scale ML-driven multiscale simulation ensembles to study the interactions
MuMMI RAS v0.1 Released: Nov 16, 2021 MuMMI RAS is the application component of the MuMMI framework developed to create large-scale ML-driven multisca
Provide an input CSV and a target field to predict, generate a model + code to run it.
automl-gs Give an input CSV file and a target field you want to predict to automl-gs, and get a trained high-performing machine learning or deep learn
Hack-All is a simple CLI tool that helps ethical-hackers to make a reverse connection without knowing the target device in use is it computer or phone
Hack-All is a simple CLI tool that helps ethical-hackers to make a reverse connection without knowing the target device in use is it computer
RMTD: Robust Moving Target Defence Against False Data Injection Attacks in Power Grids
RMTD: Robust Moving Target Defence Against False Data Injection Attacks in Power Grids Real-time detection performance. This repo contains the code an
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
The Pythone Script will generate a (.)sh file with reverse shell codes then you can execute the script on the target
Pythone Script will generate a (.)sh file with reverse shell codes then you can execute the script on the targetPythone Script will generate a (.)sh file with reverse shell codes then you can execute the script on the target
cLoops2: full stack analysis tool for chromatin interactions
cLoops2: full stack analysis tool for chromatin interactions Introduction cLoops2 is an extension of our previous work, cLoops. From loop-calling base
Bioinformatics tool for exploring RNA-Protein interactions
Explore RNA-Protein interactions. RNPFind is a bioinformatics tool. It takes an RNA transcript as input and gives a list of RNA binding protein (RBP)
Drug Discovery App Using Lipinski's Rule-of-Five.
Drug Discovery App A Drug Discovery App Using Lipinski's Rule-of-Five. TAPIWA CHAMBOKO 🚀 About Me I'm a full stack developer experienced in deploying
Readings for "A Unified View of Relational Deep Learning for Polypharmacy Side Effect, Combination Therapy, and Drug-Drug Interaction Prediction."
Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp
Code for ICMI2020 and ICMI2021 papers: "Studying Person-Specific Pointing and Gaze Behavior for Multimodal Referencing of Outside Objects from a Moving Vehicle" and "ML-PersRef: A Machine Learning-based Personalized Multimodal Fusion Approach for Referencing Outside Objects From a Moving Vehicle"
ML-PersRef This repository has python code (in jupyter notebooks) for both of the following papers: ML-PersRef: A Machine Learning-based Personalized
Visualization Data Drug in thailand during 2014 to 2020
Visualization Data Drug in thailand during 2014 to 2020 Data sorce from ข้อมูลเปิดภาครัฐ สำนักงาน ป.ป.ส Inttroducing program Using tkinter module for
A python script made for personal use to monitor for sports card restocks on target.com since they are sold out often
TargetProductMonitor A python script made for personal use to monitor for sports card resocks on target.com since they are sold out often. When a rest
A simple API wrapper for Discord interactions.
Your ultimate Discord interactions library for discord.py. About | Installation | Examples | Discord | PyPI About What is discord-py-interactions? dis
Deep generative models of 3D grids for structure-based drug discovery
What is liGAN? liGAN is a research codebase for training and evaluating deep generative models for de novo drug design based on 3D atomic density grid
Migration Manager (MM) is a very small utility that can list source servers in a target account and apply mass launch template modifications.
Migration Manager Migration Manager (MM) is a very small utility that can list source servers in a target account and apply mass launch template modif
ghotok mail - lets you find available contact email addresses from target website
ghotok-mail ghotok mail - lets you find available contact email addresses from target website git clone https://github.com/josifkhan/ghotok-mail cd gh
Predicting lncRNA–protein interactions based on graph autoencoders and collaborative training
Predicting lncRNA–protein interactions based on graph autoencoders and collaborative training Code for our paper "Predicting lncRNA–protein interactio
Implementing yolov4 target detection and tracking based on nao robot
Implementing yolov4 target detection and tracking based on nao robot
Implementation of several Bayesian multi-target tracking algorithms, including Poisson multi-Bernoulli mixture filters for sets of targets and sets of trajectories. The repository also includes the GOSPA metric and a metric for sets of trajectories to evaluate performance.
This repository contains the Matlab implementations for the following multi-target filtering/tracking algorithms: - Folder PMBM contains the implemen
Unit testing AWS interactions with pytest and moto. These examples demonstrate how to structure, setup, teardown, mock, and conduct unit testing. The source code is only intended to demonstrate unit testing.
Unit Testing Interactions with Amazon Web Services (AWS) Unit testing AWS interactions with pytest and moto. These examples demonstrate how to structu
Script to get a notification when a product, on Amazon Warehouse, is available within a target price
Amazon_Warehouse_Scraping This script aims to scrape Amazon Warehouse and send an email back if there are products whose price matches with the target
This is the code of NeurIPS'21 paper "Towards Enabling Meta-Learning from Target Models".
ST This is the code of NeurIPS 2021 paper "Towards Enabling Meta-Learning from Target Models". If you use any content of this repo for your work, plea
Using Clinical Drug Representations for Improving Mortality and Length of Stay Predictions
Using Clinical Drug Representations for Improving Mortality and Length of Stay Predictions Usage Clone the code to local. https://github.com/tanlab/MI
Official implementation of deep-multi-trajectory-based single object tracking (IEEE T-CSVT 2021).
DeepMTA_PyTorch Officical PyTorch Implementation of "Dynamic Attention-guided Multi-TrajectoryAnalysis for Single Object Tracking", Xiao Wang, Zhe Che
Forecasting Nonverbal Social Signals during Dyadic Interactions with Generative Adversarial Neural Networks
ForecastingNonverbalSignals This is the implementation for the paper Forecasting Nonverbal Social Signals during Dyadic Interactions with Generative A
Code for my ORSUM, ACM RecSys 2020, HeroGRAPH: A Heterogeneous Graph Framework for Multi-Target Cross-Domain Recommendation
HeroGRAPH Code for my ORSUM @ RecSys 2020, HeroGRAPH: A Heterogeneous Graph Framework for Multi-Target Cross-Domain Recommendation Paper, workshop pro
Beyond Clicks: Modeling Multi-Relational Item Graph for Session-Based Target Behavior Prediction
MGNN-SPred This is our Tensorflow implementation for the paper: WenWang,Wei Zhang, Shukai Liu, Qi Liu, Bo Zhang, Leyu Lin, and Hongyuan Zha. 2020. Bey
Detecting Beneficial Feature Interactions for Recommender Systems, AAAI 2021
Detecting Beneficial Feature Interactions for Recommender Systems (L0-SIGN) This is our implementation for the paper: Su, Y., Zhang, R., Erfani, S., &
Coarse implement of the paper "A Simultaneous Denoising and Dereverberation Framework with Target Decoupling", On DNS-2020 dataset, the DNSMOS of first stage is 3.42 and second stage is 3.47.
SDDNet Coarse implement of the paper "A Simultaneous Denoising and Dereverberation Framework with Target Decoupling", On DNS-2020 dataset, the DNSMOS