Python 3d-medical-imaging-segmentation Resources

Unet-pytorch a unet implementation for Image semantic segmentation 参考网上的Unet做分割的代码，做了一个针对kaggle地盐识别的，请去以下地址获取数据集: https://www.kaggle.com/c/tgs-salt-id

A Semantic Segmentation Network for Urban-Scale Building Footprint Extraction Using RGB Satellite Imagery This repository is the official implementati

SenFormer: Efficient Self-Ensemble Framework for Semantic Segmentation Efficient Self-Ensemble Framework for Semantic Segmentation by Walid Bousselham

MISSFormer Code for paper "MISSFormer: An Effective Medical Image Segmentation Transformer". Please read our preprint at the following link: paper_add

Description Data augmentation libarary for Deep Learning, which supports images, segmentation masks, labels and keypoints. Furthermore, SOLT is fast a

This is a GUI interface which can process forest fire detection, smoke detection and fire segmentation. Yolov5 is used to detect fire and smoke and unet is used to segment fire.

Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation Introduction This is a PyTorch

🚀 If it helps you, click a star! ⭐ Update log 2020.12.10 Project structure adjustment, the previous code has been deleted, the adjustment will be re-

Prototype-based Incremental Few-Shot Semantic Segmentation Fabio Cermelli, Massimiliano Mancini, Yongqin Xian, Zeynep Akata, Barbara Caputo -- BMVC 20

You Only 👀 Once for Panoptic 🚗 Perception You Only Look at Once for Panoptic driving Perception by Dong Wu, Manwen Liao, Weitian Zhang, Xinggang Wan

CPPE - 5 CPPE - 5 (Medical Personal Protective Equipment) is a new challenging dataset with the goal to allow the study of subordinate categorization

HOG Algorithm Implementation Description HOG (Histograms of Oriented Gradients) Algorithm is an algorithm aiming to realize object segmentation (edge

Computer_Vision_Segmentation_Fun Segmentation of Images and Video. Tools: pytorch Models: Classic model - GrabCut Deep model - Deeplabv3_resnet101 Flo

WORD: Revisiting Organs Segmentation in the Whole Abdominal Region (Paper and DataSet). [New] Note that all the emails about the download permission o

NHDRRNet-PyTorch This is the PyTorch implementation of Deep HDR Imaging via A Non-Local Network (TIP 2020). 0. Differences between Original Paper and

Decoupling Zero-Shot Semantic Segmentation This is the official code for the arxiv. ZegFormer is the first framework that decouple the zero-shot seman

Deep Learning segmentation suite dessigned for 2D microscopy image segmentation This repository provides researchers with a code to try different enco

MT-UNet Update 2021/11/19 Thank you for your interest in our work. We have uploaded the code of our MTUNet to help peers conduct further research on i

SSUL - Official Pytorch Implementation (NeurIPS 2021) SSUL: Semantic Segmentation with Unknown Label for Exemplar-based Class-Incremental Learning Sun

CUSTOMER SEGMENTATION COHORT RFM CLUSTERING TỔNG QUAN VỀ HỆ THỐNG DỮ LIỆU Nên chuyển qua theme màu dark thì sẽ nhìn đẹp hơn https://customer-segmentat

AdelaiDet is an open source toolbox for multiple instance-level detection and recognition tasks.

Using pytorch to implement unet network for liver image segmentation.

University1652-Baseline [Paper] [Slide] [Explore Drone-view Data] [Explore Satellite-view Data] [Explore Street-view Data] [Video Sample] [中文介绍] This

Rule-based Customer Segmentation Business Problem A game company wants to create level-based new customer definitions (personas) by using some feature

SegFormer: Simple and Efficient Design for Semantic Segmentation with Transformers Figure 1: Performance of SegFormer-B0 to SegFormer-B5. Project page

Forest R-CNN: Large-Vocabulary Long-Tailed Object Detection and Instance Segmentation (ACM MM 2020) Official implementation of: Forest R-CNN: Large-Vo

YOLOv5DS Multi-task yolov5 with detection and segmentation based on yolov5(branch v6.0) decoupled head anchor free segmentation head README中文 Ablation

SeqFormer: a Frustratingly Simple Model for Video Instance Segmentation SeqFormer SeqFormer: a Frustratingly Simple Model for Video Instance Segmentat

Mask2Former: Masked-attention Mask Transformer for Universal Image Segmentation in TensorFlow 2 Bowen Cheng, Ishan Misra, Alexander G. Schwing, Alexan

Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation Introduction This is a PyTorch

SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration

Specialized project Created by Katrine Nguyen and Martin Wangen-Eriksen as a part of our specialized project at Norwegian University of Science and Te

Hypernet-Ensemble Learning of Segmentation Probability for Medical Image Segmentation with Ambiguous Labels The implementation of Hypernet-Ensemble Le

Read and write TIFF files Tifffile is a Python library to store numpy arrays in TIFF (Tagged Image File Format) files, and read image and metadata fro

AHDRNet-PyTorch This is the PyTorch implementation of Attention-guided Network for Ghost-free High Dynamic Range Imaging (CVPR 2019). The official cod

The Large Labelled Logo Dataset (L3D): A Multipurpose and Hand-Labelled Continuously Growing Dataset Website: https://lhf-labs.github.io/tm-dataset Da

Deep Levelset for Box-supervised Instance Segmentation in Aerial Images Wentong Li, Yijie Chen, Wenyu Liu, Jianke Zhu* Any questions or discussions ar

Winning submission to the 2021 Brain Tumor Segmentation Challenge This repo contains the codes and pretrained weights for the winning submission to th

RegSeg The official implementation of "Rethink Dilated Convolution for Real-time Semantic Segmentation" Paper: arxiv D block Decoder Setup Install the

Larch: Data Analysis Tools for X-ray Spectroscopy and More Documentation: http://xraypy.github.io/xraylarch Code: http://github.com/xraypy/xraylarch L

rastrainer rastrainer is a QGIS plugin to training remote sensing semantic segmentation model based on PaddlePaddle. UI TODO Init UI. Add Block. Add l

BT-Unet: A-Self-supervised-learning-framework-for-biomedical-image-segmentation-using-Barlow-Twins Deep learning has brought most profound contributio

3D CT Scan Segmentation With Occupancy Network This repo implements a 3D superresolution segmentation task for an airport baggage dataset. Our final p

bbc-speech-segmenter: Voice Activity Detection & Speaker Diarization A complete speech segmentation system using Kaldi and x-vectors for voice activit

SM-PPM This is a Pytorch implementation of our paper "Style Mixing and Patchwise Prototypical Matching for One-Shot Unsupervised Domain Adaptive Seman

Winning submission to the 2021 Brain Tumor Segmentation Challenge This repo contains the codes and pretrained weights for the winning submission to th

Implicit Feature Refinement for Instance Segmentation This repository is an official implementation of the ACM Multimedia 2021 paper Implicit Feature

SOLO: Segmenting Objects by Locations This project hosts the code for implementing the SOLO algorithms for instance segmentation. SOLO: Segmenting Obj

Robust Place Recognition using an Imaging Lidar A place recognition package using high-resolution imaging lidar. For best performance, a lidar equippe

Implementation of our ECCV 2020 paper The Devil is in Classification: A Simple Framework for Long-tail Instance Segmentation This repo contains code o

A Strong Single-Stage Baseline for Long-Tailed Problems This project provides a strong single-stage baseline for Long-Tailed Classification (under Ima

Imbalaced Classification and Robust Semantic Segmentation This repo implements two algoritms. The imbalance clibration (IC) algorithm for image classi

Image-Level or Object-Level? A Tale of Two Resampling Strategies for Long-Tailed Detection Figure 1: Our proposed Resampling at image-level and obect-

MosaicOS Mosaic of Object-centric Images as Scene-centric Images (MosaicOS) for long-tailed object detection and instance segmentation. Introduction M

NorCal Normalization Calibration (NorCal) for Long-Tailed Object Detection and Instance Segmentation On Model Calibration for Long-Tailed Object Detec

Generative Zero-Shot Learning for Semantic Segmentation of 3D Point Clouds Björn Michele1), Alexandre Boulch1), Gilles Puy1), Maxime Bucher1) and Rena

Simulation of moving particles under microscopic imaging Install scipy numpy scikit-image tiffile Run python simulation.py Read result https://imagej

Hashtag segmentation is the task of automatically inserting the missing spaces between the words in a hashtag. Hashformers applies Transformer models

Deep Levelset for Box-supervised Instance Segmentation in Aerial Images Wentong Li, Yijie Chen, Wenyu Liu, Jianke Zhu* This code is based on MMdetecti

H2G-Net This repository contains the code relevant for the proposed design H2G-Net, which was introduced in the manuscript "Hybrid guiding: A multi-re

ClothingSegmenter U2NET fashion image/clothing segmenter based on https://github.com/levindabhi/cloth-segmentation Overview The ClothingSegmenter exec

Perturbed Self-Distillation: Weakly Supervised Large-Scale Point Cloud Semantic Segmentation (ICCV2021) This is the implementation of PSD (ICCV 2021),

Simple pipeline for experimenting with radiomics features Installation git clone https://github.com/piotrekwoznicki/ClassyRadiomics.git cd classrad pi

U-Net Brain Tumor Segmentation 🚀 ：Feb 2019 the data processing implementation in this repo is not the fastest way (code need update, contribution is

TF-Unet General purpose U-Network implemented in Keras for image segmentation Getting started • Training • Evaluation Getting started Looking for Jupy

Reliable Propagation-Correction Modulation for Video Object Segmentation (AAAI22) Preview version paper of this work is available at: https://arxiv.or

PolyphonicFormer: Unified Query Learning for Depth-aware Video Panoptic Segmentation Winner method of the ICCV-2021 SemKITTI-DVPS Challenge. [arxiv] [

Label-Efficient Semantic Segmentation with Diffusion Models Official implementation of the paper Label-Efficient Semantic Segmentation with Diffusion

A paper Introduction This is an official release of the paper Separate Contrastive Learning for Organs-at-Risk and Gross-Tumor-Volume Segmentation wit

Reliable Propagation-Correction Modulation for Video Object Segmentation (AAAI22) Preview version paper of this work is available at: https://arxiv.or

Grouped SSD (GSSD) for liver lesion detection from multi-phase CT Note: the MICCAI 2018 paper only covers the multi-phase lesion detection part of thi

Efficient Two-Step Networks for Temporal Action Segmentation This repository provides a PyTorch implementation of the paper Efficient Two-Step Network

Imaging Transcriptomics Imaging transcriptomics is a methodology that allows to identify patterns of correlation between gene expression and some prop

Self-Supervised Generative Style Transfer for One-Shot Medical Image Segmentation This repository contains the Pytorch implementation of the proposed

farabio is a minimal PyTorch toolkit for out-of-the-box deep learning support in biomedical imaging. For further information, see Wikis and Docs.

Panoptic SegFormer: Delving Deeper into Panoptic Segmentation with Transformers Results results on COCO val Backbone Method Lr Schd PQ Config Download

COCO-Stuff 10K dataset v1.1 (outdated) Holger Caesar, Jasper Uijlings, Vittorio Ferrari Overview Welcome to official homepage of the COCO-Stuff [1] da

Chinese Word Vectors 中文词向量 中文 This project provides 100+ Chinese Word Vectors (embeddings) trained with different representations (dense and sparse),

Train neural network for semantic segmentation (deep lab V3) with pytorch in 50 lines of code Train net semantic segmentation net using Trans10K datas

TransFGU: A Top-down Approach to Fine-Grained Unsupervised Semantic Segmentation Zhaoyun Yin, Pichao Wang, Fan Wang, Xianzhe Xu, Hanling Zhang, Hao Li

PartImageNet: A Large, High-Quality Dataset of Parts We will release our dataset and scripts soon after cleaning and approval. Introduction PartImageN

Mask2Former: Masked-attention Mask Transformer for Universal Image Segmentation Bowen Cheng, Ishan Misra, Alexander G. Schwing, Alexander Kirillov, Ro

TransFGU: A Top-down Approach to Fine-Grained Unsupervised Semantic Segmentation Zhaoyun Yin, Pichao Wang, Fan Wang, Xianzhe Xu, Hanling Zhang, Hao Li

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

FCN-pytorch-easiest Trying to be the easiest FCN pytorch implementation and just in a get and use fashion Here I use a handbag semantic segmentation f

Semantic segmentation using Tensorflow eager execution Requirement Python 2.7+ Tensorflow-gpu OpenCv H5py Scikit-learn Numpy Imgaug Train with eager e

Website • Docs • Twitter • Join Slack Community What is Label Studio? Label Studio is an open source data labeling tool. It lets you label data types

M2MRF: Many-to-Many Reassembly of Features for Tiny Lesion Segmentation in Fundus Images This repo is the official implementation of paper "M2MRF: Man

ContIG: Self-supervised Multimodal Contrastive Learning for Medical Imaging with Genetics This is the code implementation of the paper "ContIG: Self-s

UNet++: A Nested U-Net Architecture for Medical Image Segmentation UNet++ is a new general purpose image segmentation architecture for more accurate i

Depth Clustering This is a fast and robust algorithm to segment point clouds taken with Velodyne sensor into objects. It works with all available Velo

DAFormer: Improving Network Architectures and Training Strategies for Domain-Adaptive Semantic Segmentation [Arxiv] [Paper] As acquiring pixel-wise an

Data Consistency for Magnetic Resonance Imaging Data Consistency (DC) is crucial for generalization in multi-modal MRI data and robustness in detectin

MatrixProfile MatrixProfile is a Python 3 library, brought to you by the Matrix Profile Foundation, for mining time series data. The Matrix Profile is

Mask R-CNN for Object Detection and Segmentation This is an implementation of Mask R-CNN on Python 3, Keras, and TensorFlow. The model generates bound

BMVOS This is the official implementation of Pixel-Level Bijective Matching for Video Object Segmentation, to appear in WACV 2022. @article{cho2021pix

CPN (ICCV2021) This is an implementation of Complementary Patch for Weakly Supervised Semantic Segmentation, which is accepted by ICCV2021 poster. Thi

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

End-to-End Referring Video Object Segmentation with Multimodal Transformers This repo contains the official implementation of the paper: End-to-End Re

Res2Net for Instance segmentation and Object detection using MaskRCNN Since the MaskRCNN-benchmark of facebook is deprecated, we suggest to use our mm