Python 3d-medical-imaging-segmentation Resources

Training-code-of-STM This repository fully reproduces Space-Time Memory Networks Performance on Davis17 val set&Weights backbone training stage traini

Object detection and instance segmentation toolkit based on PaddlePaddle.

MultiResUNet Rethinking the U-Net architecture for multimodal biomedical image segmentation This repository contains the original implementation of "M

Few-shot 3D Point Cloud Semantic Segmentation Created by Na Zhao from National University of Singapore Introduction This repository contains the PyTor

RefineMask: Towards High-Quality Instance Segmentation with Fine-Grained Features (CVPR 2021) This repo is the official implementation of RefineMask:

BMW-IntelOpenVINO-Segmentation-Inference-API This is a repository for a semantic segmentation inference API using the OpenVINO toolkit. It's supported

: We present a novel, real-time, semantic segmentation network in which the encoder both encodes and generates the parameters (weights) of the decoder. Furthermore, to allow maximal adaptivity, the weights at each decoder block vary spatially. For this purpose, we design a new type of hypernetwork, composed of a nested U-Net for drawing higher level context features

Trove Trove is a research framework for building weakly supervised (bio)medical named entity recognition (NER) and other entity attribute classifiers

Introduction English | 简体中文 MMOCR is an open-source toolbox based on PyTorch and mmdetection for text detection, text recognition, and the correspondi

BMW-Anonymization-Api Data privacy and individuals’ anonymity are and always have been a major concern for data-driven companies. Therefore, we design

BMW Semantic Segmentation GPU/CPU Inference API This is a repository for a Semantic Segmentation inference API using the Gluoncv CV toolkit. The train

Data Annotation, Data Labeling, Annotation Tooling, Training Data for Machine Learning

Context Decoupling Augmentation for Weakly Supervised Semantic Segmentation The code of: Context Decoupling Augmentation for Weakly Supervised Semanti

PixelPick This is an official implementation of the paper "All you need are a few pixels: semantic segmentation with PixelPick." [Project page] [Paper

PLOP: Learning without Forgetting for Continual Semantic Segmentation This repository contains all of our code. It is a modified version of Cermelli e

Documentation: https://mmsegmentation.readthedocs.io/ English | 简体中文 Introduction MMSegmentation is an open source semantic segmentation toolbox based

Introduction vedaseg is an open source semantic segmentation toolbox based on PyTorch. Features Modular Design We decompose the semantic segmentation

Welcome to MedicalTorch MedicalTorch is an open-source framework for PyTorch, implementing an extensive set of loaders, pre-processors and datasets fo

Deep learning networks This repo is used to research convolutional networks primarily for computer vision tasks. For this purpose, the repo contains (

Faster R-CNN and Mask R-CNN in PyTorch 1.0 maskrcnn-benchmark has been deprecated. Please see detectron2, which includes implementations for all model

Detectorch - detectron for PyTorch (Disclaimer: this is work in progress and does not feature all the functionalities of detectron. Currently only inf

PyTorch for Semantic Segmentation This repository contains some models for semantic segmentation and the pipeline of training and testing models, impl

ReCo - Regional Contrast This repository contains the source code of ReCo and baselines from the paper, Bootstrapping Semantic Segmentation with Regio

[AAAI 2021]DropLoss for Long-Tail Instance Segmentation [AAAI 2021] DropLoss for Long-Tail Instance Segmentation Ting-I Hsieh*, Esther Robb*, Hwann-Tz

Swin Transformer for Object Detection This repo contains the supported code and configuration files to reproduce object detection results of Swin Tran

Semi-supervised Semantic Segmentation with Directional Context-aware Consistency (CAC) Xin Lai*, Zhuotao Tian*, Li Jiang, Shu Liu, Hengshuang Zhao, Li

Hypercorrelation Squeeze for Few-Shot Segmentation This is the implementation of the paper "Hypercorrelation Squeeze for Few-Shot Segmentation" by Juh

InfoPro-Pytorch The Information Propagation algorithm for training deep networks with local supervision. (ICLR 2021) Revisiting Locally Supervised Lea

CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT CheXbert is an accurate, automated dee

[CVPR 2021] Rethinking Semantic Segmentation from a Sequence-to-Sequence Perspective with Transformers

A collection of loss functions for medical image segmentation

wsss-analysis The code of: A Comprehensive Analysis of Weakly-Supervised Semantic Segmentation in Different Image Domains, arXiv pre-print 2019 paper.

SASSnet Code for paper: Shape-aware Semi-supervised 3D Semantic Segmentation for Medical Images(MICCAI 2020) Our code is origin from UA-MT You can fin

Domain Generalization for Medical Imaging Classification with Linear Dependency Regularization The code release of paper 'Domain Generalization for Me

USD-Seg This project is an implement of paper USD-Seg:Learning Universal Shape Dictionary for Realtime Instance Segmentation, based on FCOS detector f

Leveraging Instance-, Image- and Dataset-Level Information for Weakly Supervised Instance Segmentation This paper has been accepted and early accessed

Deep Occlusion-Aware Instance Segmentation with Overlapping BiLayers [BCNet, CVPR 2021] This is the official pytorch implementation of BCNet built on

Prototypical Pseudo Label Denoising and Target Structure Learning for Domain Adaptive Semantic Segmentation (CVPR 2021, official Pytorch implementatio

Pywick High-Level Training framework for Pytorch Pywick is a high-level Pytorch training framework that aims to get you up and running quickly with st

Pytorch-toolbelt A pytorch-toolbelt is a Python library with a set of bells and whistles for PyTorch for fast R&D prototyping and Kaggle farming: What

Rembg Virtual Greenscreen Edition is a tool to create a green screen matte for videos

Rembg Video Virtual Green Screen Edition

matrixprofile-ts matrixprofile-ts is a Python 2 and 3 library for evaluating time series data using the Matrix Profile algorithms developed by the Keo

STUMPY STUMPY is a powerful and scalable library that efficiently computes something called the matrix profile, which can be used for a variety of tim

SA-UNet: Spatial Attention U-Net for Retinal Vessel Segmentation(ICPR 2020) Overview This code is for the paper: Spatial Attention U-Net for Retinal V

FFB6D This is the official source code for the CVPR2021 Oral work, FFB6D: A Full Flow Biderectional Fusion Network for 6D Pose Estimation. (Arxiv) Tab

FedDG: Federated Domain Generalization on Medical Image Segmentation via Episodic Learning in Continuous Frequency Space by Quande Liu, Cheng Chen, Ji

OCR Resources This repository contains a collection of resources (including the papers and datasets) of OCR (Optical Character Recognition). Contents

Arabic OCR OCR system for Arabic language that converts images of typed text to machine-encoded text. The system currently supports only letters (29 l

Code for the AAAI18 paper PixelLink: Detecting Scene Text via Instance Segmentation, by Dan Deng, Haifeng Liu, Xuelong Li, and Deng Cai. Contributions

This is the official implementation of "Multi-Oriented Scene Text Detection via Corner Localization and Region Segmentation". For more details, please

Textline Detection Detect textlines in document images Introduction This tool performs border, region and textline detection from document image data

Handwritten Line Text Recognition using Deep Learning with Tensorflow Description Use Convolutional Recurrent Neural Network to recognize the Handwrit

Handwritten-Number-Recognition-With-Image-Segmentation Info About this repository This Repository is aimed at reading handwritten images of numbers an

Eynollah Document Layout Analysis Introduction This tool performs document layout analysis (segmentation) from image data and returns the results as P

ocrd_segment This repository aims to provide a number of OCR-D-compliant processors for layout analysis and evaluation. Installation In your virtual e

OCR Segmentation a deep learning model for page layout analysis / segmentation. dependencies tensorflow1.8 python3 dataset: uw3-framed-lines-degraded-

ocroseg This is a deep learning model for page layout analysis / segmentation. There are many different ways in which you can train and run it, but by

P2PaLA Page to PAGE Layout Analysis (P2PaLA) is a toolkit for Document Layout Analysis based on Neural Networks. 💥 Try our new DEMO for online baseli

dhSegment dhSegment is a tool for Historical Document Processing. Its generic approach allows to segment regions and extract content from different ty

引用 本项目模型BiLSTM+CRF参考论文：http://www.aclweb.org/anthology/N16-1030 ,IDCNN+CRF参考论文：https://arxiv.org/abs/1702.02098 构建 安装好bazel代码构建工具，安装好tensorflow（目前本项目需

Word segmentation Implementation of scale space technique for word segmentation as proposed by R. Manmatha and N. Srimal. Even though the paper is fro

Character Segmentation Segment characters and spaces in one text line,from this paper Chinese English mixed Character Segmentation as Semantic Segment

Textline Detection Detect textlines in document images Introduction This tool performs border, region and textline detection from document image data

[CVPR 2021] Modular Interactive Video Object Segmentation: Interaction-to-Mask, Propagation and Difference-Aware Fusion

TTNet-Pytorch The implementation for the paper "TTNet: Real-time temporal and spatial video analysis of table tennis" An introduction of the project c

MMDetection is an open source object detection toolbox based on PyTorch. It is a part of the OpenMMLab project.

CTC segmentation CTC segmentation can be used to find utterances alignments within large audio files. This repository contains the ctc-segmentation py

VisTR: End-to-End Video Instance Segmentation with Transformers This is the official implementation of the VisTR paper: Installation We provide instru

CoTr: Efficient 3D Medical Image Segmentation by bridging CNN and Transformer This is the official pytorch implementation of the CoTr: Paper: CoTr: Ef

involution Official implementation of a neural operator as described in Involution: Inverting the Inherence of Convolution for Visual Recognition (CVP

TransBTS: Multimodal Brain Tumor Segmentation Using Transformer This repo is the official implementation for TransBTS: Multimodal Brain Tumor Segmenta

Albumentations Albumentations is a Python library for image augmentation. Image augmentation is used in deep learning and computer vision tasks to inc

imgaug This python library helps you with augmenting images for your machine learning projects. It converts a set of input images into a new, much lar

Gluon CV Toolkit | Installation | Documentation | Tutorials | GluonCV provides implementations of the state-of-the-art (SOTA) deep learning models in

InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu

Medical-Transformer Pytorch Code for the paper "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" About this repo: This repo

SETR - Pytorch Since the original paper (Rethinking Semantic Segmentation from a Sequence-to-Sequence Perspective with Transformers.) has no official

Meshroom is a free, open-source 3D Reconstruction Software based on the AliceVision Photogrammetric Computer Vision framework. Learn more details abou

TransUNet This repo holds code for TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation Usage

Unsupervised Semantic Segmentation by Contrasting Object Mask Proposals This repo contains the Pytorch implementation of our paper: Unsupervised Seman

This repository provides the source code for training and testing state-of-the-art click-based interactive segmentation models with the official PyTorch implementation

Puzzle-CAM The official implementation of "Puzzle-CAM: Improved localization via matching partial and full features".

YouTokenToMe YouTokenToMe is an unsupervised text tokenizer focused on computational efficiency. It currently implements fast Byte Pair Encoding (BPE)

pySBD: Python Sentence Boundary Disambiguation (SBD) pySBD - python Sentence Boundary Disambiguation (SBD) - is a rule-based sentence boundary detecti

SentencePiece SentencePiece is an unsupervised text tokenizer and detokenizer mainly for Neural Network-based text generation systems where the vocabu

A Python library for audio feature extraction, classification, segmentation and applications This doc contains general info. Click here for the comple

Exploring Cross-Image Pixel Contrast for Semantic Segmentation Exploring Cross-Image Pixel Contrast for Semantic Segmentation, Wenguan Wang, Tianfei Z

SAHI: Slicing Aided Hyper Inference A vision library for performing sliced inference on large images/small objects Overview Object detection and insta

rigidmask Code for "Learning to Segment Rigid Motions from Two Frames". ** This is a partial release with inference and evaluation code.

Unseen Object Clustering: Learning RGB-D Feature Embeddings for Unseen Object Instance Segmentation Introduction In this work, we propose a new method

EmbedSeg Introduction This repository hosts the version of the code used for the preprint Embedding-based Instance Segmentation of Microscopy Images.

YouTokenToMe YouTokenToMe is an unsupervised text tokenizer focused on computational efficiency. It currently implements fast Byte Pair Encoding (BPE)

pySBD: Python Sentence Boundary Disambiguation (SBD) pySBD - python Sentence Boundary Disambiguation (SBD) - is a rule-based sentence boundary detecti

SentencePiece SentencePiece is an unsupervised text tokenizer and detokenizer mainly for Neural Network-based text generation systems where the vocabu

YolactEdge, the first competitive instance segmentation approach that runs on small edge devices at real-time speeds. Specifically, YolactEdge runs at up to 30.8 FPS on a Jetson AGX Xavier (and 172.7 FPS on an RTX 2080 Ti) with a ResNet-101 backbone on 550x550 resolution images.

Trankit: A Light-Weight Transformer-based Python Toolkit for Multilingual Natural Language Processing Trankit is a light-weight Transformer-based Pyth

Pytorch Medical Segmentation Read Chinese Introduction：Here！ Recent Updates 2021.1.8 The train and test codes are released. 2021.2.6 A bug in dice was

SWA Object Detection This project hosts the scripts for training SWA object detectors, as presented in our paper: @article{zhang2020swa, title={SWA

Segmentation Transformer Implementation of Segmentation Transformer in PyTorch, a new model to achieve SOTA in semantic segmentation while using trans