Python 3d-medical-imaging-segmentation Resources

Convolutional Neural Network Visualizations This repository contains a number of convolutional neural network visualization techniques implemented in

Hierarchical Memory Matching Network for Video Object Segmentation Hongje Seong, Seoung Wug Oh, Joon-Young Lee, Seongwon Lee, Suhyeon Lee, Euntai Kim

AlignShift NEW: Code for our new MICCAI'21 paper "Asymmetric 3D Context Fusion for Universal Lesion Detection" will also be pushed to this repository

English | 简体中文 PaddleSeg PaddleSeg has released the new version including the following features: Our team won the AutoNUE@CVPR 2021 challenge, where

Semi-supervised-learning-for-medical-image-segmentation. Recently, semi-supervised image segmentation has become a hot topic in medical image computin

Hierarchical Memory Matching Network for Video Object Segmentation Hongje Seong, Seoung Wug Oh, Joon-Young Lee, Seongwon Lee, Suhyeon Lee, Euntai Kim

An efficient 3D semantic segmentation framework for Urban-scale point clouds like SensatUrban, Campus3D, etc.

Scientific Computational Imaging COde (SCICO) SCICO is a Python package for solving the inverse problems that arise in scientific imaging applications

Add filters (background blur, etc) to your webcam on Linux.

CondNet: Conditional Classifier for Scene Segmentation Introduction The fully convolutional network (FCN) has achieved tremendous success in dense vis

FIDNet_SemanticKITTI Motivation Implementing complicated network modules with only one or two points improvement on hardware is tedious. So here we pr

Dense Deep Unfolding Network with 3D-CNN Prior for Snapshot Compressive Imaging, ICCV2021 [PyTorch Code]

Retina Blood Vessels Segmentation This is an implementation of the research paper "Retina Blood Vessel Segmentation Using A U-Net Based Convolutional

pytorch-deeplab-resnet DeepLab resnet v2 model implementation in pytorch. The architecture of deepLab-ResNet has been replicated exactly as it is from

pytorch-fcn PyTorch implementation of Fully Convolutional Networks. Requirements pytorch = 0.2.0 torchvision = 0.1.8 fcn = 6.1.5 Pillow scipy tqdm

A PyTorch implementation of V-Net Vnet is a PyTorch implementation of the paper V-Net: Fully Convolutional Neural Networks for Volumetric Medical Imag

PiWiSe Pixel-wise segmentation on the VOC2012 dataset using pytorch. FCN SegNet PSPNet UNet RefineNet For a more complete implementation of segmentati

Pillow Python Imaging Library (Fork) Pillow is the friendly PIL fork by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lund

EfficientSegmentation Introduction EfficientSegmentation is an open source, PyTorch-based segmentation framework for 3D medical image. Features A whol

MIDeepSeg: Minimally Interactive Segmentation of Unseen Objects from Medical Images Using Deep Learning [MedIA or Arxiv] and [Demo] This repository pr

FaPN: Feature-aligned Pyramid Network for Dense Image Prediction [arXiv] [Project Page] @inproceedings{ huang2021fapn, title={{FaPN}: Feature-alig

Streaming speaker diarization Overlap-aware low-latency online speaker diarization based on end-to-end local segmentation by Juan Manuel Coria, Hervé

Polyp-PVT by Bo Dong, Wenhai Wang, Deng-Ping Fan, Jinpeng Li, Huazhu Fu, & Ling Shao. This repo is the official implementation of "Polyp-PVT: Polyp Se

JOINT This is the official implementation of Joint Inductive and Transductive learning for Video Object Segmentation, to appear in ICCV 2021. @inproce

Streaming speaker diarization Overlap-aware low-latency online speaker diarization based on end-to-end local segmentation by Juan Manuel Coria, Hervé

bartpy Python bindings for BART. Overview This repo contains code to generate an updated Python wrapper for the Berkeley Advance Reconstruction Toolbo

Dynamic Multi-scale Filters for Semantic Segmentation (DMNet ICCV'2019) Introduction Official implementation of Dynamic Multi-scale Filters for Semant

Cross-Image Region Mining with Region Prototypical Network for Weakly Supervised Segmentation The code of: Cross-Image Region Mining with Region Proto

Mask-RCNN on Mycobacterium tuberculosis This is an example of object detection on Mycobacterium Tuberculosis using Mask RCNN. Implement of Mask R-CNN

语义分割学习实验-基于VOC数据集 usage： 下载VOC数据集，将JPEGImages SegmentationClass两个文件夹放入到data文件夹下。 终端切换到目标目录，运行python train.py -h查看训练 (torch) qust116-jq@qustx-X299-WU8:

Mask-RCNN on Mycobacterium tuberculosis This is an example of object detection on Mycobacterium Tuberculosis using Mask RCNN. Implement of Mask R-CNN

BASNet Boundary-Aware Segmentation Network for Mobile and Web Applications This repository contain implementation of BASNet in tensorflow/keras. comme

Full-Duplex Strategy for Video Object Segmentation (ICCV, 2021) Authors: Ge-Peng Ji, Keren Fu, Zhe Wu, Deng-Ping Fan*, Jianbing Shen, & Ling Shao This

nnFormer: Interleaved Transformer for Volumetric Segmentation Code for paper "nnFormer: Interleaved Transformer for Volumetric Segmentation ". Please

Introduction The official repository for "Mining Contextual Information Beyond Image for Semantic Segmentation". Our full code has been merged into ss

WobblyStitcher Introduction A scalable implementation of WobblyStitcher Dependencies $ python -m pip install numpy scikit-image Visualization ImageJ

Adaptive Pyramid Context Network for Semantic Segmentation (APCNet CVPR'2019) Introduction Official implementation of Adaptive Pyramid Context Network

TFlite Ultra Fast Lane Detection Inference Example scripts for the detection of lanes using the ultra fast lane detection model in Tensorflow Lite. So

Medical image preprocessing and augmentation toolkit for deep learning. Part of the PyTorch Ecosystem.

LiteHRNet Benchmark 🔥 🔥 Based on MMsegmentation 🔥 🔥 Cityscapes FCN resize concat config mIoU last mAcc last eval last mIoU best mAcc best eval bes

[Japanese/English] GrabCut-Annotation-Tool GrabCut-Annotation-Tool.mp4 OpenCVのGrabCut()を利用したアノテーションツールです。 セマンティックセグメンテーション向けのデータセット作成にご使用いただけます。 ※Grab

About This repository provides data and code for the paper: Scalable Data Annotation Pipeline for High-Quality Large Speech Datasets Development (subm

Pytorch-NLU，一个中文文本分类、序列标注工具包，支持中文长文本、短文本的多类、多标签分类任务，支持中文命名实体识别、词性标注、分词等序列标注任务。 Ptorch NLU, a Chinese text classification and sequence annotation toolkit, supports multi class and multi label classification tasks of Chinese long text and short text, and supports sequence annotation tasks such as Chinese named entity recognition, part of speech tagging and word segmentation.

webcam-filters Add filters (background blur, etc) to your webcam on Linux. Video conferencing applications tend to either lack video effects altogethe

SSTNet Instance Segmentation in 3D Scenes using Semantic Superpoint Tree Networks(ICCV2021) by Zhihao Liang, Zhihao Li, Songcen Xu, Mingkui Tan, Kui J

This is a simple demo for performing semantic segmentation on the Kitti dataset using Pytorch-Lightning and optimizing the neural network by monitoring and comparing runs with Weights & Biases.

🔥Deep Learning for 3D Point Clouds (IEEE TPAMI, 2020)

PaddlePaddle Vision Transformers State-of-the-art Visual Transformer and MLP Models for PaddlePaddle 🤖 PaddlePaddle Visual Transformers (PaddleViT or

PrimitiveNet Source code for the paper: Jingwei Huang, Yanfeng Zhang, Mingwei Sun. [PrimitiveNet: Primitive Instance Segmentation with Local Primitive

YOLOP-opencv-dnn 使用OpenCV部署全景驾驶感知网络YOLOP，可同时处理交通目标检测、可驾驶区域分割、车道线检测，三项视觉感知任务，依然是包含C++和Python两种版本的程序实现 onnx文件从百度云盘下载，链接：https://pan.baidu.com/s/1A_9cldU

sssegmentation is a general framework for our research on strongly supervised semantic segmentation.

Example scripts for the detection of lanes using the ultra fast lane detection model in ONNX.

Self-Regulation for Semantic Segmentation This is the PyTorch implementation for paper Self-Regulation for Semantic Segmentation, ICCV 2021. Citing SR

Change is Everywhere Single-Temporal Supervised Object Change Detection in Remote Sensing Imagery by Zhuo Zheng, Ailong Ma, Liangpei Zhang and Yanfei

This project is a collection of the open source pytorch code for knowledge distillation, especially for the perception tasks, including semantic segmentation, depth estimation, object detection and instance segmentation.

pspnet-pytorch PyTorch implementation of PSPNet segmentation network Original paper Pyramid Scene Parsing Network Details This is a slightly different

The Pytorch Implementation of Category-consistent deep network learning for accurate vehicle logo recognition This is the offical website for paper ''

THU模式识别2021春 -- Jittor 医学图像分割 模型列表 本仓库收录了课程作业中同学们采用jittor框架实现的如下模型： UNet SegNet DeepLab V2 DANet EANet HarDNet及其改动HarDNet_alter PSPNet OCNet OCRNet DL

Flood Detection Challenge This repository contains code for our submission to the ETCI 2021 Competition on Flood Detection (Winning Solution #2). Acco

ST++ This is the official PyTorch implementation of our paper: ST++: Make Self-training Work Better for Semi-supervised Semantic Segmentation. Lihe Ya

Exploiting a Joint Embedding Space for Generalized Zero-Shot Semantic Segmentation This is an official implementation of the paper "Exploiting a Joint

CaraNet: Context Axial Reverse Attention Network for Small Medical Objects Segmentation This repository contains the implementation of a novel attenti

Pixel-Level Cycle Association This is the Pytorch implementation of our NeurIPS 2020 Oral paper Pixel-Level Cycle Association: A New Perspective for D

High-Resolution Transformer for Dense Prediction Introduction This is the official implementation of High-Resolution Transformer (HRT). We present a H

Dynamic Divide-and-Conquer Adversarial Training for Robust Semantic Segmentation This is a pytorch project for the paper Dynamic Divide-and-Conquer Ad

Reference Action Segmentation Evaluation Code This repository contains the reference code for action segmentation evaluation. If you have a bug-fix/im

Vision-Language Transformer and Query Generation for Referring Segmentation Please consider citing our paper in your publications if the project helps

Semantic Segmentation on MIT ADE20K dataset in PyTorch This is a PyTorch implementation of semantic segmentation models on MIT ADE20K scene parsing da

Segmenter-based-on-OpenMMLab "Segmenter: Transformer for Semantic Segmentation, arxiv 2105.05633." reproduced via mmsegmentation. We reproduce Segment

This repo is the official implementation of our paper "Instance Adaptive Self-training for Unsupervised Domain Adaptation". The purpose of this repo is to better communicate with you and respond to your questions. This repo is almost the same with Another-Version, and you can also refer to that version.

Introduction This repository is the code that needs to be submitted for OpenMMLab Algorithm Ecological Challenge, the paper is BoxInst: High-Performan

Simpler is Better: Few-shot Semantic Segmentation with Classifier Weight Transformer. ICCV2021. Introduction We proposed a novel model training paradi

Shape-aware Convolutional Layer (ShapeConv) PyTorch implementation of ShapeConv: Shape-aware Convolutional Layer for RGB-D Indoor Semantic Segmentatio

News The code of MCTrans has been released. if you are interested in contributing to the standardization of the medical image analysis community, plea

Segmenter: Transformer for Semantic Segmentation Segmenter: Transformer for Semantic Segmentation by Robin Strudel*, Ricardo Garcia*, Ivan Laptev and

Updates (2020/06/21) Code of PVTv2 is released! PVTv2 largely improves PVTv1 and works better than Swin Transformer with ImageNet-1K pre-training. Pyr

An image labelling tool for creating segmentation data sets, for Django and Flask.

PRIN/SPRIN: On Extracting Point-wise Rotation Invariant Features Overview This repository is the Pytorch implementation of PRIN/SPRIN: On Extracting P

Data-Annotation-Tool How to Run this Tool? To run this software, follow the steps: git clone https://github.com/Autonomous-Car-Project/Data-Annotation

ml4h is a toolkit for machine learning on clinical data of all kinds including genetics, labs, imaging, clinical notes, and more

A Python package implementing various colour checker detection algorithms and related utilities.

Panoptic Segmentation Forecasting Colin Graber, Grace Tsai, Michael Firman, Gabriel Brostow, Alexander Schwing - CVPR 2021 [Link to paper] We propose

ASAP-Net This project implements ASAP-Net of paper ASAP-Net: Attention and Structure Aware Point Cloud Sequence Segmentation (BMVC2020). Overview We i

Open-World Entity Segmentation Project Website Lu Qi*, Jason Kuen*, Yi Wang, Jiuxiang Gu, Hengshuang Zhao, Zhe Lin, Philip Torr, Jiaya Jia This projec

SwiftNet The official PyTorch implementation of SwiftNet:Real-time Video Object Segmentation, which has been accepted by CVPR2021. Requirements Python

IVOS-W Paper Learning to Recommend Frame for Interactive Video Object Segmentation in the Wild Zhaoyun Yin, Jia Zheng, Weixin Luo, Shenhan Qian, Hanli

Segmentation in Style: Unsupervised Semantic Image Segmentation with Stylegan and CLIP Abstract: We introduce a method that allows to automatically se

Recall Loss for Semantic Segmentation (This repo implements the paper: Recall Loss for Semantic Segmentation) Download Synthia dataset The model uses

Deep Optics for Single-shot High-dynamic-range Imaging Code associated with the paper "Deep Optics for Single-shot High-dynamic-range Imaging" CVPR, 2

VMNet: Voxel-Mesh Network for Geodesic-Aware 3D Semantic Segmentation Created by Zeyu HU Introduction This work is based on our paper VMNet: Voxel-Mes

Moving Objects Segmentation On this project I tried to perform moving objects segmentation using background subtraction technique. the introduced meth

CrossFormer This repository is the code for our paper CrossFormer: A Versatile Vision Transformer Based on Cross-scale Attention. Introduction Existin

Photographic Image Synthesis with Cascaded Refinement Networks-Pytorch (https://arxiv.org/abs/1707.09405) This is a Pytorch implementation of cascaded

Use this instead: https://github.com/facebookresearch/maskrcnn-benchmark A Pytorch Implementation of Detectron Example output of e2e_mask_rcnn-R-101-F

Open-World Entity Segmentation Project Website Lu Qi*, Jason Kuen*, Yi Wang, Jiuxiang Gu, Hengshuang Zhao, Zhe Lin, Philip Torr, Jiaya Jia This projec

A Strong Baseline for Image Semantic Segmentation Introduction This project is an open source semantic segmentation toolbox based on PyTorch. It is ba

Dual super-resolution learning for semantic segmentation 2021-01-02 Subpixel Update Happy new year! The 2020-12-29 update of SISR with subpixel conv p

DSP Official implementation of "DSP: Dual Soft-Paste for Unsupervised Domain Adaptive Semantic Segmentation". Accepted by ACM Multimedia 2021. Authors

FCN-pytorch-easiest Trying to be the easiest FCN pytorch implementation and just in a get and use fashion Here I use a handbag semantic segmentation f

This is the implementation of our work Deep Extreme Cut (DEXTR), for object segmentation from extreme points.