Python Drug-interaction Resources

🔥 DrugOOD 🔥 : OOD Dataset Curator and Benchmark for AI Aided Drug Discovery This is the official implementation of the DrugOOD project, this is the

Molecular Docking integrated in Jupyter Notebooks Description | Citation | Installation | Examples | Limitations | License Table of content Descriptio

Drug Interaction Prediction with Tigerlily Documentation | Example Notebook | Youtube Video | Project Report Tigerlily is a TigerGraph based system de

Ditto: Building Digital Twins of Articulated Objects from Interaction Zhenyu Jiang, Cheng-Chun Hsu, Yuke Zhu CVPR 2022, Oral Project | arxiv News 2022

GEN-VLKT Code for our CVPR 2022 paper "GEN-VLKT: Simplify Association and Enhance Interaction Understanding for HOI Detection". Contributed by Yue Lia

Disentangled Representation Learning for Text-Video Retrieval This is a PyTorch implementation of the paper Disentangled Representation Learning for T

Improving evidential deep learning via multi task learning It is a repository of AAAI2022 paper, “Improving evidential deep learning via multi-task le

EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein

GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.

[AAAI2022] Detecting Human-Object Interactions with Object-Guided Cross-Modal Calibrated Semantics Overall pipeline of OCN. Paper Link: [arXiv] [AAAI

Inspectral Spectral decomposition for characterizing long-range interaction prof

RDMAss A Python Discord bot creating an interaction with RDM API. Features Assig

GNN_PPI Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction". Lear

I have collected data about a set of patients, all of whom suffered from the same illness. During their course of treatment, each patient responded to one of 5 medications, Drug A, Drug B, Drug c, Drug x and y. Part of our job is to build a model to find out which drug might be appropriate for a future patient with the same illness. The feature sets of this dataset are Age, Sex, Blood Pressure, and Cholesterol of patients, and the target is the drug that each patient responded to.

OntoProtein This is the implement of the paper "OntoProtein: Protein Pretraining With Ontology Embedding". OntoProtein is an effective method that mak

Interaction Grounded Learning This repository contains a simple PyTorch implementation of the ideas presented in the paper Interaction Grounded Learni

Full Transformer Framework for Robust Point Cloud Registration with Deep Information Interaction. arxiv This repository contains python scripts for tr

HAKE-Action HAKE-Action (TensorFlow) is a project to open the SOTA action understanding studies based on our Human Activity Knowledge Engine. It inclu

A 3D Generative Model for Structure-Based Drug Design Coming soon... Citation @inproceedings{luo2021sbdd, title={A 3D Generative Model for Structu

SG2HOI This repository is for our paper Exploiting Scene Graphs for Human-Object Interaction Detection accepted by ICCV 2021. Installation Pytorch 1.7

This file contains the following documents sumbited for Baruch CIS9665 group 9 fall 2021. 1. Dataset: drug_reviews.csv 2. python codes for text classi

System Usability Scale Analysis Toolkit The System Usability Scale (SUS) Analysis Toolkit is a web-based python application that provides a compilatio

Natural Language Processing for Adverse Drug Reaction (ADR) Detection This repo contains code from a project to identify ADRs in discharge summaries a

NiceGUI NiceGUI is an easy to use, Python-based UI framework, which renderes to the web browser. You can create buttons, dialogs, markdown, 3D scences

discord-ui A discord.py extension for using discord ui/interaction features pip package ▪ read the docs ▪ examples Introduction This is a discord.py u

NeoDTI NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions (Bioinformatics).

SAG-DTA The code is the implementation for the paper 'SAG-DTA: Prediction of Drug–Target Affinity Using Self-Attention Graph Network'. Requirements py

Documentation | External Resources | Datasets | Examples ChemicalX is a deep learning library for drug-drug interaction, polypharmacy side effect and

CyberBattleSim April 8th, 2021: See the announcement on the Microsoft Security Blog. CyberBattleSim is an experimentation research platform to investi

News! Aug 2020: v0.4.0 version of AlphaPose is released! Stronger tracking! Include whole body(face,hand,foot) keypoints! Colab now available. Dec 201

Domain-informed Neural Networks Codes for building and training the neural network model described in Domain-informed neural networks for interaction

QAHOI QAHOI: Query-Based Anchors for Human-Object Interaction Detection (paper) Requirements PyTorch = 1.5.1 torchvision = 0.6.1 pip install -r requ

Gihan Jayatilaka*, Jameel Hassan*, Suren Sritharan*, Janith Senananayaka, Harshana Weligampola, et. al., 2021. Holistic Interpretation of Public Scenes Using Computer Vision and Temporal Graphs to Identify Social Distancing Violations. arXiv preprint.

Interactsh An OOB interaction gathering server and client library Features • Usage • Interactsh Client • Interactsh Server • Interactsh Integration •

Anchor Retouching via Model Interaction for Robust Object Detection in Aerial Images In this paper, we present an effective Dynamic Enhancement Anchor

SECSE SECSE: Systemic Evolutionary Chemical Space Explorer Chemical space exploration is a major task of the hit-finding process during the pursuit of

LitMatter A template for rapid experimentation and scaling deep learning models on molecular and crystal graphs. How to use Clone this repository and

Update: if you're looking for ColBERTv2 code, you can find it alongside a new simpler API, in the branch new_api. ColBERT ColBERT is a fast and accura

UPT: Unary–Pairwise Transformers This repository contains the official PyTorch implementation for the paper Frederic Z. Zhang, Dylan Campbell and Step

Learning Motion Priors for 4D Human Body Capture in 3D Scenes (LEMO) Official Pytorch implementation for 2021 ICCV (oral) paper "Learning Motion Prior

On Interaction Between Augmentations and Corruptions in Natural Corruption Robustness This repository provides the code for the paper On Interaction B

GSAN Introduction Code for paper GSAN: Graph Self-Attention Network for Learning Spatial-Temporal Interaction Representation in Autonomous Driving, wh

Molecular Sets (MOSES): A benchmarking platform for molecular generation models Deep generative models are rapidly becoming popular for the discovery

CoaDTI Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2 Abstract Environment The test was conducted i

insilico: A Python package to process & model ChEMBL data. ChEMBL is a manually curated chemical database of bioactive molecules with drug-like proper

Ingeniamotion Ingeniamotion is a library that works over ingenialink and aims to simplify the interaction with Ingenia's drives. Requirements Python 3

Human Pose Estimation Related Publication

This is the repository for AIR^2 for Interaction Prediction. Explanation of the solution: Video: link License AIR is released under the Apache 2.0 lic

VIC Visual Interaction with Code A simple tool for debugging and interacting with running python code. This tool is designed to make it easy to inspec

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

cLoops2: full stack analysis tool for chromatin interactions Introduction cLoops2 is an extension of our previous work, cLoops. From loop-calling base

Explore RNA-Protein interactions. RNPFind is a bioinformatics tool. It takes an RNA transcript as input and gives a list of RNA binding protein (RBP)

Drug Discovery App A Drug Discovery App Using Lipinski's Rule-of-Five. TAPIWA CHAMBOKO 🚀 About Me I'm a full stack developer experienced in deploying

Polypharmacy - DDI - Synergy Survey The Survey Paper This repository accompanies our survey paper A Unified View of Relational Deep Learning for Polyp

InsightIDR4Py Allows simplified Python interaction with Rapid7's InsightIDR REST API. InsightIDR4Py allows analysts to query log data from Rapid7 Insi

Visualization Data Drug in thailand during 2014 to 2020 Data sorce from ข้อมูลเปิดภาครัฐ สำนักงาน ป.ป.ส Inttroducing program Using tkinter module for

What is liGAN? liGAN is a research codebase for training and evaluating deep generative models for de novo drug design based on 3D atomic density grid

AEI: Actors-Environment Interaction with Adaptive Attention for Temporal Action Proposals Generation A pytorch-version implementation codes of paper:

Using Clinical Drug Representations for Improving Mortality and Length of Stay Predictions Usage Clone the code to local. https://github.com/tanlab/MI

Writer_unblock Straight-forward command line interfacing with GPT-3. Finding yourself stuck at a conceptual stage? Spinning your wheels needlessly on

Multi-modal Interaction Graph Convolutioal Network for Temporal Language Localization in Videos Official implementation for Multi-Modal Interaction Gr

SCINet This is the original PyTorch implementation of the following work: Time Series is a Special Sequence: Forecasting with Sample Convolution and I

grungegirl. cli-based drug search for girls. welcome. grungegirl is aiming to be the premier drug culture application. it is the hacker's encyclopedia

手势交互地图 GBIM(Gesture-Based Interaction map)，基于视觉深度神经网络的交互地图，通过电脑摄像头观察使用者的手势变化，进而控制地图进行简单的交互。网络使用PaddleX提供的轻量级模型PPYOLO Tiny以及MobileNet V3 small，使得整个模型大小约10MB左右，即使在CPU下也能快速定位和识别手势。

A powerful and flexible machine learning platform for drug discovery

dc29-discord-signalbot A python discord client interaction emulator for the DC29 badge code channel Prep Open Developer mode Open the developer mode f

-Nyokong. Drug design and development team HackBio internship is a virtual bioinformatics program that introduces students and professional to advance

A central task in drug discovery is searching, screening, and organizing large chemical databases. Here, we implement clustering on molecular similarity. We support multiple methods to provide a interactive exploration of chemical space.

Interaction-Network-Pytorch Pytorch Implementraion of Interaction Networks for Learning about Objects, Relations and Physics. Interaction Network is a

Visual-Interaction-Networks An implementation of Deepmind visual interaction networks in Pytorch. Introduction For the purpose of understanding the ch

Evidential Deep Learning for Guided Molecular Property Prediction and Discovery Ava Soleimany*, Alexander Amini*, Samuel Goldman*, Daniela Rus, Sangee

WILSON Cloud Respwnder What is this? WILSON Cloud Respwnder is a Web Interaction Logger Sending Out Notifications (WILSON) with the ability to serve c

Heterogeneous INteract and aggreGatE (GraphHINGE) This is a pytorch implementation of GraphHINGE model. This is the experiment code in the following w

DeepCDR Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network This work has been accepted to ECCB2020 and was also published in the

[TensorFlow] Protein Interface Prediction using Graph Convolutional Networks Unofficial TensorFlow implementation of Protein Interface Prediction usin

Official PyTorch Implementation for HOTR: End-to-End Human-Object Interaction Detection with Transformers (CVPR'2021, Oral Presentation) HOTR: End-to-

Vid2Doppler: Synthesizing Doppler Radar Data from Videos for Training Privacy-Preserving Activity Recognition This is the research repository for Vid2

piglet PIGLeT: Language Grounding Through Neuro-Symbolic Interaction in a 3D World [ACL 2021] This repo contains code and data for PIGLeT. If you like

NExT-QA We reproduce some SOTA VideoQA methods to provide benchmark results for our NExT-QA dataset accepted to CVPR2021 (with 1 'Strong Accept' and 2

SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization This is the code for our paper ``SumGNN: Multi-typed Drug

Populating 3D Scenes by Learning Human-Scene Interaction [Project Page] [Paper] License Software Copyright License for non-commercial scientific resea

Datamol is a python library to work with molecules. It's a layer built on top of RDKit and aims to be as light as possible.

Structural basis for solubility in protein expression systems Large-scale protein production for biotechnology and biopharmaceutical applications rely

Long-term-Motion-in-3D-Scenes This is an implementation of the CVPR'21 paper "Synthesizing Long-Term 3D Human Motion and Interaction in 3D". Please ch

Datamol is a python library to work with molecules. It's a layer built on top of RDKit and aims to be as light as possible.

notebookJS enables the execution of custom JavaScript code in Python Notebooks (Jupyter Notebook and Google Colab). This Python library can be useful for implementing and reusing interactive Data Visualizations in the Notebook environment.

Contact Potential Field This repo contains model, demo, and test codes of our paper: CPF: Learning a Contact Potential Field to Model the Hand-object

Summit Summit is a set of tools for optimising chemical processes. We’ve started by targeting reactions. What is Summit? Currently, reaction optimisat

[CVPR 2021] Modular Interactive Video Object Segmentation: Interaction-to-Mask, Propagation and Difference-Aware Fusion

Thug The number of client-side attacks has grown significantly in the past few years shifting focus on poorly protected vulnerable clients. Just as th

QPIC: Query-Based Pairwise Human-Object Interaction Detection with Image-Wide Contextual Information by Masato Tamura, Hiroki Ohashi, and Tomoaki Yosh

Splinter plugin for the pytest runner Install pytest-splinter pip install pytest-splinter Features The plugin provides a set of fixtures to use splin

简体中文 | English PaddleRobotics paddleRobotics是基于paddle的机器人开源算法库集，包括人机交互、复杂运动控制、环境感知、slam定位导航等开源算法部分。 人机交互 主动多模交互技术TFVT-HRI 主动多模交互技术是通过视觉、语音、触摸传感器等输入机器人

Home page https://mechanicalsoup.readthedocs.io/ Overview A Python library for automating interaction with websites. MechanicalSoup automatically stor