Python Protein-visualization Resources

animatplot A python package for making interactive as well as animated plots with matplotlib. Requires Python = 3.5 Matplotlib = 2.2 (because slider

Lets-Plot Lets-Plot is an open-source plotting library for statistical data. It is implemented using the Kotlin programming language. The design of Le

In-depth EDA (target analysis, comparison, feature analysis, correlation) in two lines of code! Sweetviz is an open-source Python library that generat

JoyPy JoyPy is a one-function Python package based on matplotlib + pandas with a single purpose: drawing joyplots (a.k.a. ridgeline plots). The code f

openTSNE openTSNE is a modular Python implementation of t-Distributed Stochasitc Neighbor Embedding (t-SNE) [1], a popular dimensionality-reduction al

Introduction The facets project contains two visualizations for understanding and analyzing machine learning datasets: Facets Overview and Facets Dive

Chartify Chartify is a Python library that makes it easy for data scientists to create charts. Why use Chartify? Consistent input data format: Spend l

"To deal with hyper-planes in a 14 dimensional space, visualize a 3D space and say 'fourteen' very loudly. Everyone does it." - Geoff Hinton Overview

PyVista Deployment Build Status Metrics Citation License Community 3D plotting and mesh analysis through a streamlined interface for the Visualization

Perspective is an interactive visualization component for large, real-time datasets. Originally developed for J.P. Morgan's trading business, Perspect

missingno Messy datasets? Missing values? missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities tha

VisPy: interactive scientific visualization in Python Main website: http://vispy.org VisPy is a high-performance interactive 2D/3D data visualization

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

UMAP Uniform Manifold Approximation and Projection (UMAP) is a dimension reduction technique that can be used for visualisation similarly to t-SNE, bu

Altair http://altair-viz.github.io Altair is a declarative statistical visualization library for Python. With Altair, you can spend more time understa

Bokeh is an interactive visualization library for modern web browsers. It provides elegant, concise construction of versatile graphics, and affords hi

Dash Dash is the most downloaded, trusted Python framework for building ML & data science web apps. Built on top of Plotly.js, React and Flask, Dash t

seaborn: statistical data visualization Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing

plotly.py Latest Release User forum PyPI Downloads License Data Science Workspaces Our recommended IDE for Plotly’s Python graphing library is Dash En

vprof vprof is a Python package providing rich and interactive visualizations for various Python program characteristics such as running time and memo

Pattern Pattern is a web mining module for Python. It has tools for: Data Mining: web services (Google, Twitter, Wikipedia), web crawler, HTML DOM par

Best-of Machine Learning with Python 🏆 A ranked list of awesome machine learning Python libraries. Updated weekly. This curated list contains 840 awe

trRosetta - Pytorch (wip) Implementation of trRosetta and trDesign for Pytorch, made into a convenient package

httpstat httpstat visualizes curl(1) statistics in a way of beauty and clarity. It is a single file 🌟 Python script that has no dependency 👏 and is

PyG2Plot 🎨 Python3 binding for @AntV/G2Plot which an interactive and responsive charting library. Based on the grammar of graphics, you can easily ma

sorting_algo_visualizer Python script to generate a visualization of various sorting algorithms, image or video.

VisualizingTwitchCommunities This project maps communities of streamers on Twitch.tv based on shared viewership. The data is collected from the Twitch

VizGradCAM VizGradCam is the fastest way to visualize GradCAM in Keras models. GradCAM helps with providing visual explainability of trained models an

Geometric Vector Perceptron Implementation of Geometric Vector Perceptron, a simple circuit with 3d rotation equivariance for learning over large biom

Welcome to TensorWatch TensorWatch is a debugging and visualization tool designed for data science, deep learning and reinforcement learning from Micr

Dash Dash is the most downloaded, trusted Python framework for building ML & data science web apps. Built on top of Plotly.js, React and Flask, Dash t

Installation | Documentation | Gitter Chat | Google Group Bowtie Introduction Bowtie is a library for writing dashboards in Python. No need to know we

Welcome to Scikit-plot Single line functions for detailed visualizations The quickest and easiest way to go from analysis... ...to this. Scikit-plot i

Superset A modern, enterprise-ready business intelligence web application. Why Superset? | Supported Databases | Installation and Configuration | Rele

pastalog Simple, realtime visualization server for training neural networks. Use with Lasagne, Keras, Tensorflow, Torch, Theano, and basically everyth

PyQtGraph A pure-Python graphics library for PyQt5/PyQt6/PySide2/PySide6 Copyright 2020 Luke Campagnola, University of North Carolina at Chapel Hill h

A Python package implementing a new model for text classification with visualization tools for Explainable AI 🍣 Online live demos: http://tworld.io/s

Pattern Pattern is a web mining module for Python. It has tools for: Data Mining: web services (Google, Twitter, Wikipedia), web crawler, HTML DOM par

Note: We just launched Hosted, where anyone can upload their interface for permanent hosting. Check it out! Welcome to Gradio Quickly create customiza

Pattern Pattern is a web mining module for Python. It has tools for: Data Mining: web services (Google, Twitter, Wikipedia), web crawler, HTML DOM par

Dream-Creator This project aims to simplify the process of creating a custom DeepDream model by using pretrained GoogleNet models and custom image dat

neural-dream This is a PyTorch implementation of DeepDream. The code is based on neural-style-pt. Here we DeepDream a photograph of the Golden Gate Br

Awesome Jupyter A curated list of awesome Jupyter projects, libraries and resources. Jupyter is an open-source web application that allows you to crea

Scapy Scapy is a powerful Python-based interactive packet manipulation program and library. It is able to forge or decode packets of a wide number of

pyglet pyglet is a cross-platform windowing and multimedia library for Python, intended for developing games and other visually rich applications. It

Luigi is a Python (3.6, 3.7 tested) package that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow managemen

vprof vprof is a Python package providing rich and interactive visualizations for various Python program characteristics such as running time and memo

VisPy: interactive scientific visualization in Python Main website: http://vispy.org VisPy is a high-performance interactive 2D/3D data visualization

seaborn: statistical data visualization Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing

Bokeh is an interactive visualization library for modern web browsers. It provides elegant, concise construction of versatile graphics, and affords hi

Altair http://altair-viz.github.io Altair is a declarative statistical visualization library for Python. With Altair, you can spend more time understa