Python Medical-images Resources

Mask_Detection_System A system used to detect whether a person is wearing a medical mask or not. To open the program, please follow these steps: Make

Pipeline for creating NB422-detected (ODI) catalog The repository contains a Docker-based pipeline for preprocessing observational data. The pipeline

Numbering permanent and deciduous teeth via deep instance segmentation in panoramic X-rays In this repo, you will find the instructions on how to requ

GCA-Matting: Natural Image Matting via Guided Contextual Attention The source codes and models of Natural Image Matting via Guided Contextual Attentio

Automatic Face Alignment (AFA) Carl M. Gaspar & Oliver G.B. Garrod You have lots of photos of faces like this: But you want to line up all of the face

RTM3D-PyTorch The PyTorch Implementation of the paper: RTM3D: Real-time Monocular 3D Detection from Object Keypoints for Autonomous Driving (ECCV 2020

Generative Adversarial Network - Generating Universe This repository contains part of the code used to make the images visible in the article "How doe

R interface to fastai The fastai package provides R wrappers to fastai. The fastai library simplifies training fast and accurate neural nets using mod

FAIMED 3D use fastai to quickly train fully three-dimensional models on radiological data Classification from faimed3d.all import * Load data in vari

fmi Adding additional functionality to fastai's medical imaging module To learn more about medical imaging using Fastai you can view my blog Install g

DirectVoxGO reconstructs a scene representation from a set of calibrated images capturing the scene. We achieve NeRF-comparable novel-view synthesis quality with super-fast convergence.

BaSiC Matlab code accompanying A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images by Tingying Peng, Kurt Thorn, Timm Schr

pyradiomics v3.0.1 Build Status Linux macOS Windows Radiomics feature extraction in Python This is an open-source python package for the extraction of

OCR-Streamlit-App OCR Streamlit App is used to extract text from images using python's easyocr, pytorch and streamlit packages OCR app gets an image a

AVP-BEV-OPEN Please check our new work AVP_SLAM_SIM A pkg stiching around view images(4-6cameras) to generate bird's eye view! View Demo · Report Bug

DiLBERT Repo for the paper "DiLBERT: Cheap Embeddings for Disease Related Medical NLP" Pretrained Model The pretrained model presented in the paper is

TransMorph: Transformer for Medical Image Registration keywords: Vision Transformer, Swin Transformer, convolutional neural networks, image registrati

GGB Color Space This package is implementation of GGB color space from Development of a Robust Algorithm for Detection of Nuclei and Classification of

CFPNet-M: A Light-Weight Encoder-Decoder Based Network for Multimodal Biomedical Image Real-Time Segmentation This repository contains the implementat

ruDALL-E PaddlePaddle ruDALL-E in PaddlePaddle. Install: pip install rudalle_paddle==0.0.1rc1 Run with free v100 on AI Studio. Original Pytorch versi

English | 简体中文 Introduction DeepHawkeye is a library to detect unusual patterns in images using features from pretrained neural networks Reference Pat

PNG 2 JPG All codes assume running from root directory. Please update the sys path at the beginning of the codes before running. Over View Png2Jpg too

Medical Open Network for AI MONAI is a PyTorch-based, open-source framework for deep learning in healthcare imaging, part of PyTorch Ecosystem. Its am

Front-end View Backend View Table of Contents Description Prerequisites Running Basic Information Measurements User Interface Feedback and usage Descr

Handprint The Handwritten Page Recognition Test is a command-line program that invokes HTR (handwritten text recognition) services on images of docume

AI-powered literature discovery and review engine for medical/scientific papers paperai is an AI-powered literature discovery and review engine for me

STANFORD CARS DATASET stanford-cars "The Cars dataset contains 16,185 images of 196 classes of cars. The data is split into 8,144 training images and

Create postgres tables from CSV files This first section is only relate to creating tables from CSV files using postgres container alone. Just one of

GAN JAX - A toy project to generate images from GANs with JAX This project aims to bring the power of JAX, a Python framework developped by Google and

Effect of Deep Transfer and Multi task Learning on Sperm Abnormality Detection Introduction This repository includes codes and models of "Effect of De

IntraQ: Learning Synthetic Images with Intra-Class Heterogeneity for Zero-Shot Network Quantization paper Requirements Python = 3.7.10 Pytorch == 1.7

MineClone2 MapArt This is a python3 project you can use with the MineClone2 game for Minetest. This project take an image and output a WorldEdit shema

UTNet (Accepted at MICCAI 2021) Official implementation of UTNet: A Hybrid Transformer Architecture for Medical Image Segmentation Introduction Transf

Generating Images with Recurrent Adversarial Networks Python (Theano) implementation of Generating Images with Recurrent Adversarial Networks code pro

First Order Divergence for training GANs This repository contains code accompanying the paper First Order Generative Advesarial Netoworks The majority

Simulated+Unsupervised (S+U) Learning in TensorFlow TensorFlow implementation of Learning from Simulated and Unsupervised Images through Adversarial T

cppn-gan-vae tensorflow Train Compositional Pattern Producing Network as a Generative Model, using Generative Adversarial Networks and Variational Aut

A Tensorflow implementation of the Text Conditioned Auxiliary Classifier Generative Adversarial Network for Generating Images from text descriptions

Image Super-Resolution (ISR) The goal of this project is to upscale and improve the quality of low resolution images. This project contains Keras impl

What's New Below we share, in reverse chronological order, the updates and new releases in VISSL. All VISSL releases are available here. [Oct 2021]: V

DensePose: Dense Human Pose Estimation In The Wild Rıza Alp Güler, Natalia Neverova, Iasonas Kokkinos [densepose.org] [arXiv] [BibTeX] Dense human pos

ImagesAsMesh Blender addon to import images as meshes. Inspired by: ImagesAsPlanes Installation It's like just about every other Blender addon. Downlo

This repo shows how to implement and use the pix2pix GAN model for image to image translation. The model is demonstrated on satellite images, and the

Pnuemonia Normal detection by using XRay images. Got image datas from kaggle(link is given in sources.txt file) also normal xray images from other site (also link is given) in order to avoid data disbalancing.

Welcome to Official repository of deepflash2 - a deep-learning pipeline for segmentation of ambiguous microscopic images. Quick Start in 30 seconds se

wrist-d PyTorch Implementation for Fracture Detection in Wrist Bone X-ray Images note: Paper: Under Review at MPDI Diagnostics Submission Date: Novemb

Fight Detection from Still Images in the Wild Detecting fights from still images is an important task required to limit the distribution of social med

LearningPsychologicalSpaces v0.1: v1.1: v1.2: v1.3: v1.4: v1.5: The code in this repository explores learning a mapping from images to psychological s

StableLLVE This is a Pytorch implementation of "Learning Temporal Consistency for Low Light Video Enhancement from Single Images" in CVPR 2021, by Fan

PythonImage2PDF A simple Python script to convert multiple images into a single PDF-document. Created basically for only my own needs for converting m

Face-Swapping The following program is used to swap the faces from two images. In today's world deep fake technology has become really popular . As a

UNet++: A Nested U-Net Architecture for Medical Image Segmentation UNet++ is a new general purpose image segmentation architecture for more accurate i

Medical Image Segmentation with Guided Attention This repository contains the code of our paper: "'Multi-scale self-guided attention for medical image

Implementation for paper LadderNet: Multi-path networks based on U-Net for medical image segmentation This implementation is based on orobix implement

Attention Gated Networks (Image Classification & Segmentation) Pytorch implementation of attention gates used in U-Net and VGG-16 models. The framewor

ICNet_tensorflow This repo provides a TensorFlow-based implementation of paper "ICNet for Real-Time Semantic Segmentation on High-Resolution Images,"

Keras-ICNet [paper] Keras implementation of Real-Time Semantic Segmentation on High-Resolution Images. Training in progress! Requisites Python 3.6.3 K

ICNet for Real-Time Semantic Segmentation on High-Resolution Images by Hengshuang Zhao, Xiaojuan Qi, Xiaoyong Shen, Jianping Shi, Jiaya Jia, details a

FC-DenseNet-Tensorflow This is a re-implementation of the 100 layer tiramisu, technically a fully convolutional DenseNet, in TensorFlow (Tiramisu). Th

Deep Learning Tutorial for Kaggle Ultrasound Nerve Segmentation competition, using Keras This tutorial shows how to use Keras library to build deep ne

memey A simple reddit scraper to get memes (only images) from r/ProgrammerHumor. Note Only works if you have firefox installed (yet). Instructions foo

console_images Console images in 48 colors, 216 colors and full rgb Full RGB 216 colors 48 colors If it does not work maybe you should change color_fu

terminal-photo-viewer view images in the terminal using ansi escape codes and python !! Only tested on Ubuntu 20.04.3 LTS with python version 3.8.10 D

Evaluating MVS in a CPC Scenario This repository contains the set of artficats used for the ENGN8601/8602 research project. The thesis emphasizes on t

JaMIE: a Japanese Medical Information Extraction toolkit Joint Japanese Medical Problem, Modality and Relation Recognition The Train/Test phrases requ

ADDS-DepthNet This is the official implementation of the paper Self-supervised Monocular Depth Estimation for All Day Images using Domain Separation I

Recurrent Mask Refinement for Few-Shot Medical Image Segmentation Steps Install any missing packages using pip or conda Preprocess each dataset using

GANInversion_with_ConsecutiveImgs Official code for our ICCV paper: "From Continuity to Editability: Inverting GANs with Consecutive Images" https://a

Squidle campaign downloader Python script to download entire campaign images and navigation. usage: squidle_campaign_downloader.py [-h] [--api-token A

RSC-Net: 3D Human Pose, Shape and Texture from Low-Resolution Images and Videos Implementation for "3D Human Pose, Shape and Texture from Low-Resoluti

script to rename and resize folders of images

MekaVerse-random Script for the creation of metadata and the randomization of images of MekaVerse Step to replay the random : Create a folder : output

影像處理-影像降躁化(去躁化) (Image Processing - Make Noise Images Clean) 得力於電腦效能的大幅提升以及GPU的平行運算架構，讓我們能夠更快速且有效地訓練AI，並將AI技術應用於不同領域。本篇將帶給大家的是 「將深度學習應用於影像處理中的影像降躁化 」，

GameBEye GameBEye is a Python Library to process Game Boy Camera images. Source code 📁 : https://github.com/mtouzot/GameBEye Issues 🆘 : https://gith

Batch processing with AWS Batch and CDK Welcome This repository demostrates provisioning the necessary infrastructure for running a job on AWS Batch u

SVM Données Une base d’images contient 490 images pour l’apprentissage (400 voitures et 90 bateaux), et encore 21 images pour fait des tests. Prétrait

psgresizer A PySimpleGUI Application Resize your images quickly and easily with this GUI application. Resizes and encodes to Base64 so that the result

meddlr Getting Started Meddlr is a config-driven ML framework built to simplify medical image reconstruction and analysis problems. Installation To av

A CNN implementation using only numpy. Supports multidimensional images, stride, etc. Speed up due to heavy use of slicing and mathematical simplification..

WORD: Revisiting Organs Segmentation in the Whole Abdominal Region. This repository provides the codebase and dataset for our work WORD: Revisiting Or

Alias-Free Generative Adversarial Networks (StyleGAN3) Official PyTorch implementation of the NeurIPS 2021 paper Alias-Free Generative Adversarial Net

🕳️ CygnusX1 Code by Trong-Dat Ngo. Overviews 🕳️ CygnusX1 is a multithreaded tool 🛠️ , used to search and download images from popular search engine

image-processing This module generates depth maps for shape-blocked-out images Install If working with anaconda, then from the root directory: conda e

DistMIS Distributing Deep Learning Hyperparameter Tuning for 3D Medical Image Segmentation. DistriMIS Distributing Deep Learning Hyperparameter Tuning

MedAI: Transparency in Medical Image Segmentation What is this repo This repo contains the code and experiments that are implemented to contribute in

bayesmedaug: Bayesian Optimization Library for Medical Image Segmentation. bayesmedaug optimizes your data augmentation hyperparameters for medical im

mpl-image-labeller Use Matplotlib to label images for classification. Works anywhere Matplotlib does - from the notebook to a standalone gui! For more

Stegenography-tool a tool for hiding data inside of images Quick test: do python steg-encode.py test/message.txt test/covid19.png to generate the test

Recaption Images with Generated Neural Image Caption Example Usage: Commandline: Recaption all images from folder /home/feng/Downloads/images to folde

How to Leverage Multimodal EHR Data for Better Medical Predictions? This repository contains the code of the paper: How to Leverage Multimodal EHR Dat

Term-Img Display Images in your terminal with python NOTE: This project is a work in progress and not everything on here has actually been implemented

py-image-dedup is a tool to sort out or remove duplicates within a photo library. Unlike most other solutions, py-image-dedup intentionally uses an approximate image comparison to also detect duplicates of images that slightly differ in resolution, color or other minor details.

docker-image-size-limit Limit your docker image size with a simple CLI command. Perfect to be used inside your CI process. Read the announcing post. I

overview img-proof (IPA) provides a command line utility to test images in the Public Cloud (AWS, Azure, GCE, etc.). With img-proof you can now test c

What is this? This tool allows you to convert any 14p high and 22p wide Bitmap (.bmp) to the seed needed for the Tiny-83 NFT project. Project Twitter:

Pytorch Classification A general, feasible and extensible framework for 2D image classification. Features Easy to configure (model, hyperparameters) T

ArSSR This repository is the pytorch implementation of our manuscript "An Arbitrary Scale Super-Resolution Approach for 3-Dimensional Magnetic Resonan

MedMNIST Project (Website) | Dataset (Zenodo) | Paper (arXiv) | MedMNIST v1 (ISBI'21) Jiancheng Yang, Rui Shi, Donglai Wei, Zequan Liu, Lin Zhao, Bili

Python script for finding duplicate images within a folder.

Resistor image generator I got nerdsniped into making this. It's not finished at all, and the code is messy. The end goal it generate a whole E-series