Python Imaging-lidar Resources

Disclaimer This code is provided for research and development use only. This code is not intended for use in clinical decision-making or for any other

Not All Points Are Equal: Learning Highly Efficient Point-based Detectors for 3D LiDAR Point Clouds (CVPR 2022, Oral) This is the official implementat

Scribble-Supervised LiDAR Semantic Segmentation Dataset and code release for the paper Scribble-Supervised LiDAR Semantic Segmentation, CVPR 2022 (ORA

OverlapTransformer The code for our paper submitted to RAL/IROS 2022: OverlapTransformer: An Efficient and Rotation-Invariant Transformer Network for

jie jie is a spatial genome aligner. This package parses true chromatin imaging signal from noise by aligning signals to a reference DNA polymer model

PDV PDV is LiDAR 3D object detection method. This repository is based off [OpenPCDet]. Point Density-Aware Voxels for LiDAR 3D Object Detection Jordan

HSC4D: Human-centered 4D Scene Capture in Large-scale Indoor-outdoor Space Using Wearable IMUs and LiDAR. CVPR 2022 [Project page | Video] Getting sta

LiDAR Distillation Paper | Model LiDAR Distillation: Bridging the Beam-Induced Domain Gap for 3D Object Detection Yi Wei, Zibu Wei, Yongming Rao, Jiax

Open3DSOT A general python framework for single object tracking in LiDAR point clouds, based on PyTorch Lightning. The official code release of BAT an

Underwater Light Field Retention : Neural Rendering for Underwater Imaging (UWNR) (Accepted by CVPR Workshop2022 NTIRE) Authors: Tian Ye†, Sixiang Che

On-the-Fly Adaptation Official Pytorch Code base for On-the-Fly Test-time Adaptation for Medical Image Segmentation Paper Introduction One major probl

Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.

PyTorch implementation of DD3D: Is Pseudo-Lidar needed for Monocular 3D Object detection? (ICCV 2021), Dennis Park*, Rares Ambrus*, Vitor Guizilini, Jie Li, and Adrien Gaidon.

FAST is an open-source cross-platform framework with the main goal of making it easier to do high-performance processing and visualization of medical images on heterogeneous systems utilizing both multi-core CPUs and GPUs. To achieve this, FAST use modern C++, OpenCL and OpenGL.

Data, code and pretrained models for the paper Deep Surface Reconstruction from Point Clouds with Visibility Information.

PyZebrascope - an open-source Python platform for brain-wide neural activity imaging in behaving zebrafish

Posterior temperature optimized Bayesian models for inverse problems in medical imaging Max-Heinrich Laves*, Malte Tölle*, Alexander Schlaefer, Sandy

MinkLoc++: Lidar and Monocular Image Fusion for Place Recognition Paper: MinkLoc++: Lidar and Monocular Image Fusion for Place Recognition accepted fo

Contrastive Instance Association for 4D Panoptic Segmentation using Sequences of 3D LiDAR Scans This repository contains the implementation of the pap

SweiNet SweiNet is an uncertainty-quantifying shear wave speed (SWS) estimator for ultrasound shear wave elasticity (SWE) imaging. SweiNet takes as in

Deep High Dynamic Range Imaging Benchmark This repository is the pytorch impleme

1st place solution in CCF BDCI 2021 ULSEG challenge This is the source code of the 1st place solution for ultrasound image angioma segmentation task (

coldcuts coldcuts is an R package that allows you to draw and plot automatically segmentations from 3D voxel arrays. The name is inspired by one of It

Ensemble Learning Priors Driven Deep Unfolding for Scalable Snapshot Compressive Imaging [PyTorch] Abstract Snapshot compressive imaging (SCI) can rec

[Project] Equivariant Imaging: Learning Beyond the Range Space Project about the

This repo supplements our Survey on Transformers in Medical Imaging Fahad Shamshad, Salman Khan, Syed Waqas Zamir, Muhammad Haris Khan, Munawar Hayat,

Accelerated Multi-Modal MR Imaging with Transformers Dependencies numpy==1.18.5 scikit_image==0.16.2 torchvision==0.8.1 torch==1.7.0 runstats==1.8.0 p

MT-UNet Update 2022/01/05 By another round of training based on previous weights, our model also achieved a better performance on ACDC (91.61% DSC). W

Cascaded-FCN This repository contains the pre-trained models for a Cascaded-FCN in caffe and tensorflow that segments the liver and its lesions out of

Shield: This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. Deep Learning to Improve Breast

Pneumonia Detection from X-Rays Project Overview In this project, you will apply the skills that you have acquired in this 2D medical imaging course t

Quantifying Hippocampus Volume for Alzheimer's Progression Background Alzheimer's disease (AD) is a progressive neurodegenerative disorder that result

MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemic TB whole-person research.The pipeline is based on nn-UNet and has the capability to segment 120 unique tissue classes from a whole-body 18F-FDG PET/CT image.

End-To-End Optimization of LiDAR Beam Configuration arXiv | IEEE Xplore This repository is the official implementation of the paper: End-To-End Optimi

Machine Learning use case in the field of Healthcare. In this project MONAI and pytorch frameworks are used for 3D Liver segmentation.

HRegNet: A Hierarchical Network for Efficient and Accurate Outdoor LiDAR Point Cloud Registration Environments The code mainly requires the following

CrowdCurio Time Series Annotator Library The CrowdCurio Time Series Annotation Library implements classification tasks for time series. Features Suppo

ALLINONE-Det ALLINONE-Det is a general and strong 3D object detection codebase built on OpenPCDet, which supports more methods, datasets and tools (de

ehtim (eht-imaging) Python modules for simulating and manipulating VLBI data and producing images with regularized maximum likelihood methods. This ve

Auto Vaidya An open source solution for creating end-end web app for employing the power of deep learning in various clinical scenarios like implant d

urban_road_filter: a real-time LIDAR-based urban road and sidewalk detection algorithm for autonomous vehicles Dependency ROS (tested with Kinetic and

UnpNet Citation Please cite the following paper if you use this repository in your reseach. @article {PMID:34914599, Title = {Rethinking 3-D LiDAR Po

Pseudo-LiDAR from Visual Depth Estimation: Bridging the Gap in 3D Object Detection for Autonomous Driving This paper has been accpeted by Conference o

pysero pysero enables serological measurements with multiplexed and standard ELISA assays. The project automates estimation of antibody titers from da

Autonomous Perception: 3D Object Detection with Complex-YOLO LiDAR object detect

tedana: TE Dependent ANAlysis TE-dependent analysis (tedana) is a Python library for denoising multi-echo functional magnetic resonance imaging (fMRI)

PIXOR: Real-time 3D Object Detection from Point Clouds This is a custom implementation of the paper from Uber ATG using PyTorch 1.0. It represents the

Overview BisQue is a web-based platform specifically designed to provide researchers with organizational and quantitative analysis tools for up to 5D

Logo by Zhuoning Yuan LibAUC: A Machine Learning Library for AUC Optimization Website | Updates | Installation | Tutorial | Research | Github LibAUC a

Keyhole Imaging Code & Dataset Code associated with the paper "Keyhole Imaging: Non-Line-of-Sight Imaging and Tracking of Moving Objects Along a Singl

NHDRRNet-PyTorch This is the PyTorch implementation of Deep HDR Imaging via A Non-Local Network (TIP 2020). 0. Differences between Original Paper and

MT-UNet Update 2021/11/19 Thank you for your interest in our work. We have uploaded the code of our MTUNet to help peers conduct further research on i

MinkLoc3D-SI: 3D LiDAR place recognition with sparse convolutions,spherical coordinates, and intensity Introduction The 3D LiDAR place recognition aim

Read and write TIFF files Tifffile is a Python library to store numpy arrays in TIFF (Tagged Image File Format) files, and read image and metadata fro

AHDRNet-PyTorch This is the PyTorch implementation of Attention-guided Network for Ghost-free High Dynamic Range Imaging (CVPR 2019). The official cod

Larch: Data Analysis Tools for X-ray Spectroscopy and More Documentation: http://xraypy.github.io/xraylarch Code: http://github.com/xraypy/xraylarch L

Robust Place Recognition using an Imaging Lidar A place recognition package using high-resolution imaging lidar. For best performance, a lidar equippe

Simulation of moving particles under microscopic imaging Install scipy numpy scikit-image tiffile Run python simulation.py Read result https://imagej

U-Net Brain Tumor Segmentation 🚀 ：Feb 2019 the data processing implementation in this repo is not the fastest way (code need update, contribution is

Imaging Transcriptomics Imaging transcriptomics is a methodology that allows to identify patterns of correlation between gene expression and some prop

farabio is a minimal PyTorch toolkit for out-of-the-box deep learning support in biomedical imaging. For further information, see Wikis and Docs.

Direct LiDAR Odometry: Fast Localization with Dense Point Clouds DLO is a lightweight and computationally-efficient frontend LiDAR odometry solution w

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

Cooperative Driving Dataset (CODD) The Cooperative Driving dataset is a synthetic dataset generated using CARLA that contains lidar data from multiple

ContIG: Self-supervised Multimodal Contrastive Learning for Medical Imaging with Genetics This is the code implementation of the paper "ContIG: Self-s

🤖 RoboCop 🤖 Small Robot, with LIDAR and DepthCamera. Using ROS for Maping and Navigation Made by Clemente Donoso, 📍 Chile 🇨🇱 RoboCop Lateral Fron

UNet++: A Nested U-Net Architecture for Medical Image Segmentation UNet++ is a new general purpose image segmentation architecture for more accurate i

Depth Clustering This is a fast and robust algorithm to segment point clouds taken with Velodyne sensor into objects. It works with all available Velo

Data Consistency for Magnetic Resonance Imaging Data Consistency (DC) is crucial for generalization in multi-modal MRI data and robustness in detectin

VT-UNet This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmentaion results of VT-UNet. Environmen

Semi-supervised Implicit Scene Completion from Sparse LiDAR Paper Created by Pengfei Li, Yongliang Shi, Tianyu Liu, Hao Zhao, Guyue Zhou and YA-QIN ZH

Few-shot Deep HDR Deghosting This repository contains code and pretrained models for our paper: Self-Gated Memory Recurrent Network for Efficient Scal

CodedCam Coded Illumination for Improved Lensless Imaging Paper | Supplementary results | Data and Code are available. Coded illumination for improved

SuMa++: Efficient LiDAR-based Semantic SLAM This repository contains the implementation of SuMa++, which generates semantic maps only using three-dime

The repository contains the implementations for Hyperspectral Image Classification -- Traditional to Deep Models: A Survey for Future Prospects. Model

OpenPCDet OpenPCDet is a clear, simple, self-contained open source project for LiDAR-based 3D object detection. It is also the official code release o

Semi-supervised Implicit Scene Completion from Sparse LiDAR Paper Created by Pengfei Li, Yongliang Shi, Tianyu Liu, Hao Zhao, Guyue Zhou and YA-QIN ZH

A Collection of LiDAR-Camera-Calibration Papers, Toolboxes and Notes

ICCVW21-TradiCV-Survey-of-LiDAR-Cluster Motivation In contrast to popular end-to-end deep learning LiDAR panoptic segmentation solutions, we propose a

fmi Adding additional functionality to fastai's medical imaging module To learn more about medical imaging using Fastai you can view my blog Install g

pyradiomics v3.0.1 Build Status Linux macOS Windows Radiomics feature extraction in Python This is an open-source python package for the extraction of

Medical Open Network for AI MONAI is a PyTorch-based, open-source framework for deep learning in healthcare imaging, part of PyTorch Ecosystem. Its am

Front-end View Backend View Table of Contents Description Prerequisites Running Basic Information Measurements User Interface Feedback and usage Descr

Effect of Deep Transfer and Multi task Learning on Sperm Abnormality Detection Introduction This repository includes codes and models of "Effect of De

fasterGICP This package is an improvement of fast_gicp Please cite our paper if possible. W. Jikai, M. Xu, F. Farzin, D. Dai and Z. Chen, "FasterGICP:

ShallowSeismicImaging Tools to imaging the shallow seismic structure, above 10 km, based on the ZH ratio measured from the ambient seismic noise, and

RAANet: Range-Aware Attention Network for LiDAR-based 3D Object Detection with Auxiliary Density Level Estimation Anonymous submission Abstract 3D obj

Lidar with Velocity A robust camera and Lidar fusion based velocity estimator to undistort the pointcloud. related paper: Lidar with Velocity : Motion

Self-supervised Point Cloud Prediction Using 3D Spatio-temporal Convolutional Networks This is a Pytorch-Lightning implementation of the paper "Self-s

DD3D: "Is Pseudo-Lidar needed for Monocular 3D Object detection?" Install // Datasets // Experiments // Models // License // Reference Full video Offi

AOS: Airborne Optical Sectioning Airborne Optical Sectioning (AOS) is a wide synthetic-aperture imaging technique that employs manned or unmanned airc

UNet++: A Nested U-Net Architecture for Medical Image Segmentation UNet++ is a new general purpose image segmentation architecture for more accurate i

Deep Learning Tutorial for Kaggle Ultrasound Nerve Segmentation competition, using Keras This tutorial shows how to use Keras library to build deep ne

Sparse deconvolution Python v0.3.0 Official Python implementation of the 'Sparse deconvolution', and the CPU (NumPy) and GPU (CuPy) calculation backen

mini-map-maker A tool for automatically generating 3D printable STLs from freely available lidar scan data. Screenshots Tutorial To use this script, g

FPS-Net Code for "FPS-Net: A convolutional fusion network for large-scale LiDAR point cloud segmentation", accepted by ISPRS journal of Photogrammetry

NLOS-OT Official implementation of NLOS-OT: Passive Non-Line-of-Sight Imaging Using Optimal Transport (IEEE TIP, accepted) Description In this reposit

AutomaticUSnavigation Investigating automatic navigation towards standard US views integrating MARL with the virtual US environment developed in CT2US

pyLiDAR-SLAM This codebase proposes modular light python and pytorch implementations of several LiDAR Odometry methods, which can easily be evaluated

Equivariant Imaging: Learning Beyond the Range Space Equivariant Imaging: Learning Beyond the Range Space Dongdong Chen, Julián Tachella, Mike E. Davi